3JB8
Insight into Three-dimensional structure of Maize Chlorotic Mottle Virus Revealed by Single Particle Analysis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Tombusviridae-like VP | 8097959 | 4003478 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Positive stranded ssRNA viruses-like | 8097960 | 3000918 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097960 | 3000918 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097960 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Viral_coat | e3jb8A1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
| B | Viral_coat | e3jb8B1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
| C | Viral_coat | e3jb8C1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Viral_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| C | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00729 | Viral coat protein (S domain) (Viral_coat) | Viral coat protein (S domain) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Coat protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
| IPR000937 | Icosahedral viral capsid protein, S domain | Domain |
