3KXY | pdb_00003kxy

Crystal Structure of the ExsC-ExsE Complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R [auth Y]	Cytochrome_CBB3	e3kxyY1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
O [auth X]	Semialdhyde_dhC	e3kxyX1	A: alpha arrays	X: Lipocalins/Streptavidin	H: Enterocin 7A and 7B	T: Enterocin 7A and 7B	F: Semialdhyde_dhC	ECOD (v295.2)
L [auth W]	TLP1_add_C	e3kxyW1	A: alpha arrays	X: Lipocalins/Streptavidin	H: Enterocin 7A and 7B	T: Enterocin 7A and 7B	F: TLP1_add_C	ECOD (v295.2)
I [auth V]	Cytochrome_CBB3	e3kxyV1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
F [auth U]	Cytochrome_CBB3	e3kxyU1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
C [auth T]	T3SS_ExsE	e3kxyT1	A: alpha arrays	X: Cystine-knot cytokines	H: Lipoprotein localization factors LolAB	T: Lipoprotein localization factors LolAB	F: T3SS_ExsE	ECOD (v295.2)
Q [auth L]	Cytochrome_CBB3	e3kxyL1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
P [auth K]	Cytochrome_CBB3	e3kxyK1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
N [auth J]	Cytochrome_CBB3	e3kxyJ1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
M [auth I]	Cytochrome_CBB3	e3kxyI1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
K [auth H]	Cytochrome_CBB3	e3kxyH1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
J [auth G]	Cytochrome_CBB3	e3kxyG1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
H [auth F]	Cytochrome_CBB3	e3kxyF1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
G [auth E]	Cytochrome_CBB3	e3kxyE1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
E [auth D]	Cytochrome_CBB3	e3kxyD1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
D [auth C]	Cytochrome_CBB3	e3kxyC1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
B	Cytochrome_CBB3	e3kxyB1	A: alpha arrays	X: Alpha-beta plaits	H: Phage tail protein-like	T: Transmembrane protein 14A	F: Cytochrome_CBB3	ECOD (v295.2)
A	HTH_25	e3kxyA1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HTH_25	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth V]	6.20.290.10	Special	Other non-globular	Dna Ligase	domain 1	CATH (4.3.0)
F [auth U]	6.20.290.10	Special	Other non-globular	Dna Ligase	domain 1	CATH (4.3.0)
C [auth T]	6.20.290.10	Special	Other non-globular	Dna Ligase	domain 1	CATH (4.3.0)
Q [auth L]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
P [auth K]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
N [auth J]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
M [auth I]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
K [auth H]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
J [auth G]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
H [auth F]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
G [auth E]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
E [auth D]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
D [auth C]	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
B	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)
A	3.30.1460.10	Alpha Beta	2-Layer Sandwich	Yope Regulator	Chain: A,	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], R [auth Y]	PF18286	Type III secretion system ExsE (T3SS_ExsE)	Type III secretion system ExsE	This domain is found in ExsE present in Pseudomonas aeruginosa. ExsE forms part of the ExsACDE signaling cascade which acts as an important regulatory switch that ensures timely expression of the Type III secretion system (T3SS) and so plays a critic ...	This domain is found in ExsE present in Pseudomonas aeruginosa. ExsE forms part of the ExsACDE signaling cascade which acts as an important regulatory switch that ensures timely expression of the Type III secretion system (T3SS) and so plays a critical role in facilitating infection. Prior to host-cell contact, the T3SS is inactive and ExsE and Type III Secretion Chaperone (ExsC) form a stable complex. ExsC forms a compact homodimer and ExsE wraps around one face of this dimer [1].	Domain
A, B, D [auth C], E [auth D], G [auth E], A, B, D [auth C], E [auth D], G [auth E], H [auth F], J [auth G], K [auth H], M [auth I], N [auth J], P [auth K], Q [auth L]	PF05932	Tir chaperone protein (CesT) family (CesT)	Tir chaperone protein (CesT) family	This family consists of a number of bacterial sequences which are highly similar to the Tir chaperone protein in E. Coli. In many Gram-negative bacteria, a key indicator of pathogenic potential is the possession of a specialised type III secretion sy ...	This family consists of a number of bacterial sequences which are highly similar to the Tir chaperone protein in E. Coli. In many Gram-negative bacteria, a key indicator of pathogenic potential is the possession of a specialised type III secretion system, which is utilised to deliver virulence effector proteins directly into the host cell cytosol. Many of the proteins secreted from such systems require small cytosolic chaperones to maintain the secreted substrates in a secretion-competent state. CesT serves a chaperone function for the enteropathogenic Escherichia coli (EPEC) translocated intimin receptor (Tir) protein, which confers upon EPEC the ability to alter host cell morphology following intimate bacterial attachment [1]. This family also contains several DspF and related sequences from several plant pathogenic bacteria. The "disease-specific" (dsp) region next to the hrp gene cluster of Erwinia amylovora is required for pathogenicity but not for elicitation of the hypersensitive reaction. DspF and AvrF are small (16 kDa and 14 kDa) and acidic with predicted amphipathic alpha helices in their C termini; they resemble chaperones for virulence factors secreted by type III secretion systems of animal pathogens [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], R [auth Y]	ExsE	protein binding binding protein-folding chaperone binding	negative regulation of protein transport regulation of localization establishment of protein localization regulation of cellular process regulation of protein localization transport negative regulation of biological process negative regulation of transport protein localization to extracellular region localization regulation of secretion by cell secretion by cell negative regulation of secretion negative regulation of cellular process negative regulation of protein transport regulation of localization establishment of protein localization regulation of cellular process regulation of protein localization transport negative regulation of biological process negative regulation of transport protein localization to extracellular region localization regulation of secretion by cell secretion by cell negative regulation of secretion negative regulation of cellular process negative regulation of secretion by cell intracellular protein localization negative regulation of protein localization regulation of biological process regulation of transport secretion biological regulation regulation of establishment of protein localization establishment of protein localization to extracellular region negative regulation of establishment of protein localization export from cell regulation of protein transport protein secretion establishment of localization regulation of protein secretion regulation of secretion negative regulation of protein secretion protein transport macromolecule localization cellular process cellular response to stimulus cellular response to metal ion cellular response to chemical stimulus response to stimulus response to metal ion response to chemical cellular response to calcium ion response to calcium ion protein secretion by the type III secretion system transmembrane transport protein transmembrane transport	cellular anatomical structure intracellular anatomical structure cytoplasm extracellular region
A, B, D [auth C], E [auth D], G [auth E], A, B, D [auth C], E [auth D], G [auth E], H [auth F], J [auth G], K [auth H], M [auth I], N [auth J], P [auth K], Q [auth L]	Exoenzyme S synthesis protein C	-	regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process establishment of protein localization transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization intracellular protein localization	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], R [auth Y]	IPR040866	Type III secretion system ExsE	Domain
C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], C [auth T], F [auth U], I [auth V], L [auth W], O [auth X], R [auth Y]	IPR053763	Type III Secretion System Regulatory Protein	Homologous Superfamily
A, B, D [auth C], E [auth D], G [auth E], A, B, D [auth C], E [auth D], G [auth E], H [auth F], J [auth G], K [auth H], M [auth I], N [auth J], P [auth K], Q [auth L]	IPR010261	Tir chaperone protein (CesT) family	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.