3L89
Human Adenovirus type 21 knob in complex with domains SCR1 and SCR2 of CD46 (membrane cofactor protein, MCP)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
M | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043390 | 3000902 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043389 | 3000902 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Adenovirus fiber protein knob domain | 8071494 | 4002523 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2 (2022-06-29) |
G | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
M | PF00084 | e3l89M1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
N | PF00084 | e3l89N1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
O | PF00084 | e3l89O1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
P | PF00084 | e3l89P1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
Q | PF00084 | e3l89Q1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
R | PF00084 | e3l89R1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
S | PF00084 | e3l89S1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
T | PF00084 | e3l89T1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
U | PF00084 | e3l89U1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
V | PF00084 | e3l89V1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
W | PF00084 | e3l89W1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
X | PF00084 | e3l89X1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: PF00084 | ECOD (1.6) |
A | PF00541 | e3l89A1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
B | PF00541 | e3l89B1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
C | PF00541 | e3l89C1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
D | PF00541 | e3l89D1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
E | PF00541 | e3l89E1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
G | PF00541 | e3l89G1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
H | PF00541 | e3l89H1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
I | PF00541 | e3l89I1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
J | PF00541 | e3l89J1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
K | PF00541 | e3l89K1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
L | PF00541 | e3l89L1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
F | PF00541 | e3l89F1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain | |
PF00541 | Adenoviral fibre protein (knob domain) (Adeno_knob) | Adenoviral fibre protein (knob domain) | Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, termed the carboxy-terminal kn ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017341 | Membrane cofactor protein CD46 | Family | |
IPR000436 | Sushi/SCR/CCP domain | Domain | |
IPR035976 | Sushi/SCR/CCP superfamily | Homologous Superfamily | |
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |