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 3LWJ | pdb_00003lwj

Crystal structure of Putative TetR-family transcriptional regulator (YP_752756.1) from Syntrophomonas wolfei str. Goettingen at 2.07 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyTetracyclin repressor-like 8086617 4000333 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTetR C-terminal domain-like 8090100 3000086 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHomeodomain-like 8090099 3000001 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APHe3lwjA1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: sensor domainsT: sensor domainsF: PHECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00440Bacterial regulatory proteins, tetR family (TetR_N)Bacterial regulatory proteins, tetR familyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Putative TetR-family transcriptional regulator - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023772DNA-binding HTH domain, TetR-type, conserved siteConserved Site
IPR009057Homeodomain-like superfamilyHomologous Superfamily
IPR050624Nucleoid occlusion factor SlmA/HTH-type transcriptional regulatorFamily
IPR001647DNA-binding HTH domain, TetR-typeDomain
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilyHomologous Superfamily