3OP3 | pdb_00003op3

Crystal Structure of Cell Division Cycle 25C Protein Isoform A from Homo sapiens

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3op3a_	Alpha and beta proteins (a/b)	Rhodanese/Cell cycle control phosphatase	Rhodanese/Cell cycle control phosphatase	automated matches	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	CDC25 phosphatase catalytic domain-like	8079810	4000447	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Rhodanese/Cell cycle control phosphatase	8079811	3000320	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ribosomal_L17	e3op3A1	A: a/b three-layered sandwiches	X: Repetitive alpha hairpins	H: Ankyrin repeat	T: Ankyrin repeat	F: Ribosomal_L17	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.250.10	Alpha Beta	3-Layer(aba) Sandwich	Oxidized Rhodanese	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00581	Rhodanese-like domain (Rhodanese)	Rhodanese-like domain	Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	M-phase inducer phosphatase 3	protein binding binding protein serine/threonine kinase binding kinase binding enzyme binding protein kinase binding WW domain binding protein domain specific binding phosphoric ester hydrolase activity phosphoprotein phosphatase activity catalytic activity, acting on a protein hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity protein binding binding protein serine/threonine kinase binding kinase binding enzyme binding protein kinase binding WW domain binding protein domain specific binding phosphoric ester hydrolase activity phosphoprotein phosphatase activity catalytic activity, acting on a protein hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity catalytic activity protein tyrosine phosphatase activity	regulation of cell cycle phase transition regulation of cellular process sexual reproduction regulation of reproductive process reproductive process positive regulation of biological process cell cycle phase transition meiotic cell cycle process positive regulation of cell cycle process G2/MI transition of meiotic cell cycle cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process regulation of cell cycle phase transition regulation of cellular process sexual reproduction regulation of reproductive process reproductive process positive regulation of biological process cell cycle phase transition meiotic cell cycle process positive regulation of cell cycle process G2/MI transition of meiotic cell cycle cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process positive regulation of reproductive process cell cycle G2/M phase transition regulation of biological process regulation of meiotic cell cycle regulation of cell cycle process positive regulation of meiotic cell cycle phase transition positive regulation of G2/MI transition of meiotic cell cycle regulation of meiotic cell cycle phase transition meiotic cell cycle biological regulation positive regulation of meiotic cell cycle regulation of cell cycle G2/M phase transition positive regulation of cell cycle G2/M phase transition positive regulation of cell cycle meiotic cell cycle phase transition meiosis I cell cycle process positive regulation of cell cycle phase transition cellular process regulation of G2/MI transition of meiotic cell cycle cell division mitotic nuclear division regulation of cellular component organization organelle fission regulation of mitotic nuclear division regulation of organelle organization mitotic cell cycle cellular component organization regulation of mitotic cell cycle organelle organization nuclear division mitotic cell cycle process regulation of nuclear division cellular component organization or biogenesis cell population proliferation regulation of protein modification process regulation of catalytic activity regulation of protein phosphorylation regulation of transferase activity regulation of primary metabolic process regulation of cyclin-dependent protein serine/threonine kinase activity phosphate-containing compound metabolic process protein metabolic process phosphorus metabolic process protein modification process protein phosphorylation phosphorylation regulation of protein metabolic process primary metabolic process regulation of protein kinase activity regulation of macromolecule metabolic process regulation of molecular function regulation of kinase activity regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorylation regulation of phosphorus metabolic process metabolic process macromolecule metabolic process regulation of metabolic process G2/M transition of mitotic cell cycle mitotic cell cycle phase transition positive regulation of mitotic cell cycle phase transition positive regulation of mitotic cell cycle positive regulation of G2/M transition of mitotic cell cycle regulation of G2/M transition of mitotic cell cycle regulation of mitotic cell cycle phase transition	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck ribonucleoprotein granule intracellular organelle nuclear body cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle supramolecular complex nuclear ribonucleoprotein granule nuclear lumen cytoplasm cytosol mitochondrial intermembrane space mitochondrion organelle envelope lumen organelle envelope mitochondrial envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001763	Rhodanese-like domain	Domain
A	IPR036873	Rhodanese-like domain superfamily	Homologous Superfamily
A	IPR000751	M-phase inducer phosphatase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P30307	adrenal cortex carcinoma breast cancer hepatocellular carcinoma lung cancer medulloblastoma pancreatic intraductal papillary-mucinous neoplasm schizophrenia atypical teratoid rhabdoid tumor endometriosis large cell medulloblastoma malignant glioma non-small cell lung carcinoma primitive neuroectodermal tumor autism spectrum disorder glioblastoma adrenal cortex carcinoma breast cancer hepatocellular carcinoma lung cancer medulloblastoma pancreatic intraductal papillary-mucinous neoplasm schizophrenia atypical teratoid rhabdoid tumor endometriosis large cell medulloblastoma malignant glioma non-small cell lung carcinoma primitive neuroectodermal tumor autism spectrum disorder glioblastoma lung adenocarcinoma malignant mesothelioma ovarian cancer psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.