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 3PK0 | pdb_00003pk0

Crystal structure of Short-chain dehydrogenase/reductase SDR from Mycobacterium smegmatis

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3pk0d1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Dd3pk0d2 Artifacts Tags Tags Tags N-terminal Tags (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Cd3pk0c1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Cd3pk0c2 Artifacts Tags Tags Tags N-terminal Tags (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Bd3pk0b1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Bd3pk0b2 Artifacts Tags Tags Tags N-terminal Tags (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Ad3pk0a1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)
Ad3pk0a2 Artifacts Tags Tags Tags N-terminal Tags (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilySDR-like 8063254 3000038 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySDR-like 8063254 3000038 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySDR-like 8063254 3000038 SCOP2B (2022-06-29)
ASCOP2 FamilyShort-chain dehydrogenases/reductases, SDR 8063253 4000029 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySDR-like 8063254 3000038 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DFAD_binding_4e3pk0D1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: FAD_binding_4ECOD (v295.2)
CFAD_binding_4e3pk0C1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: FAD_binding_4ECOD (v295.2)
BFAD_binding_4e3pk0B1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: FAD_binding_4ECOD (v295.2)
AC1-sete3pk0A1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
C3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13561Enoyl-(Acyl carrier protein) reductase (adh_short_C2)Enoyl-(Acyl carrier protein) reductaseThis domain is found in Enoyl-(Acyl carrier protein) reductases. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR052178Short-chain dehydrogenase/reductase SAT3-likeFamily
A, B, C, D
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR057326Ketoreductase domainDomain
A, B, C, D
IPR002347Short-chain dehydrogenase/reductase SDRFamily