3QEG | pdb_00003qeg

Crystal structure of human N12-i2 Fab, an ADCC and neutralizing anti-HIV-1 Env antibody


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]C1-sete3qegL1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: C1-setECOD (v294.1)
A [auth H]V-sete3qegH5 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: V-setECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]Fab N12i2 neutralizing mAb, anti-Env [HIV-1] L-KAPPA Homo sapiens (human) IGKV3-20*01, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202611-0)
A [auth H]Fab N12i2 neutralizing mAb, anti-Env [HIV-1] VH-CH1 Homo sapiens (human) IGHV1-69*05, IGHJ6*01, IGHJ6*02, IGHG1*01, IGHG1*02, IGHG1*03, IGHG1*04 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202611-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGKV3 Kappa-SAbDab (2026-03-27)
A [auth H]Heavy ChainIGHV1 --SAbDab (2026-03-27)