3QND
crystal structure of Ad37 fiber knob in complex with trivalent sialic acid inhibitor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Adeno_knob | e3qndA1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
B | Adeno_knob | e3qndB1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
C | Adeno_knob | e3qndC1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
D [auth E] | Adeno_knob | e3qndE1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
E [auth F] | Adeno_knob | e3qndF1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
F [auth G] | Adeno_knob | e3qndG1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: Adeno_knob | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
B | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
C | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
D [auth E] | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
E [auth F] | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
F [auth G] | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |