3TCX | pdb_00003tcx

Structure of Engineered Single Domain ICAM-1 D1 with High-Affinity aL Integrin I Domain of Native C-Terminal Helix Conformation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
USCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054755 3000071 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyvWA-like 8042676 3000832 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALipocalin_7e3tcxA1 A: a/b three-layered sandwichesX: Cystatin-likeH: sensor domainsT: sensor domainsF: Lipocalin_7ECOD (v294.1)
AA [auth a]Pkinase, APHe3tcxa1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
CPkinase, APHe3tcxC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
EPkinase, APHe3tcxE1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
MPkinase, APHe3tcxM1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
SPkinase, APHe3tcxS1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
WPkinase, APHe3tcxW1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
YPkinase, APHe3tcxY1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
UPkinase, APHe3tcxU1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
QPkinase, APHe3tcxQ1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
OPkinase, APHe3tcxO1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
KPkinase, APHe3tcxK1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
IPkinase, APHe3tcxI1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
GPkinase, APHe3tcxG1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
BA [auth b]Pkinase, APHe3tcxb1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
FPkinase, APHe3tcxF1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
HPkinase, APHe3tcxH1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
LPkinase, APHe3tcxL1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
PPkinase, APHe3tcxP1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
RPkinase, APHe3tcxR1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
XPkinase, APHe3tcxX1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
ZPkinase, APHe3tcxZ1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
VPkinase, APHe3tcxV1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
TPkinase, APHe3tcxT1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
NPkinase, APHe3tcxN1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
JPkinase, APHe3tcxJ1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
DPkinase, APHe3tcxD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase, APHECOD (v294.1)
BE1_DerP2_DerF2e3tcxB1 A: a/b three-layered sandwichesX: Cystatin-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: E1_DerP2_DerF2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
AA [auth a]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
M2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
S2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
W2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
Y2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
U2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
Q2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
O2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
I2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
G2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
BA [auth b]3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
F3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
H3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
L3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
P3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
R3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
X3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
Z3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
V3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
T3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
N3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
J3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
D3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)
B3.40.50.410 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold von Willebrand factor, type A domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03921Intercellular adhesion molecule (ICAM), N-terminal domain (ICAM_N)Intercellular adhesion molecule (ICAM), N-terminal domainICAMs normally functions to promote intercellular adhesion and signalling. However, The N-terminal domain of the receptor binds to the rhinovirus 'canyon' surrounding the icosahedral 5-fold axes, during the viral attachment process [1]. This family ...ICAMs normally functions to promote intercellular adhesion and signalling. However, The N-terminal domain of the receptor binds to the rhinovirus 'canyon' surrounding the icosahedral 5-fold axes, during the viral attachment process [1]. This family is a family that is part of the Ig superfamily and is therefore related to the family ig (Pfam:PF00047).
Domain
PF00092von Willebrand factor type A domain (VWA)von Willebrand factor type A domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Intercellular adhesion molecule 1
Integrin alpha-L

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
IPR048679Intercellular adhesion molecule 1/3/5, D2 domainDomain
IPR003599Immunoglobulin domain subtypeDomain
IPR047012Intercellular adhesion molecule/vascular cell adhesion moleculeFamily
IPR003988Intercellular adhesion moleculeDomain
IPR003987Intercellular adhesion molecule/vascular cell adhesion molecule, N-terminalDomain
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR013768Intercellular adhesion molecule, N-terminalDomain
IPR013517FG-GAP repeatRepeat
IPR013519Integrin alpha beta-propellorRepeat
IPR000413Integrin alpha chainFamily
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
IPR013649Integrin alpha, first immunoglubulin-like domainDomain
IPR028994Integrin alpha, N-terminalHomologous Superfamily
IPR002035von Willebrand factor, type ADomain
IPR048285Integrin alpha, second immunoglobulin-like domainDomain
IPR032695Integrin domain superfamilyHomologous Superfamily
IPR018184Integrin alpha chain, C-terminal cytoplasmic region, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP05362
PharosP20701