3TLW | pdb_00003tlw

The GLIC pentameric Ligand-Gated Ion Channel Loop2-21' oxidized mutant in a locally-closed conformation (LC2 subtype)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ERRM_1e3tlwE1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (develop294)
DRRM_1e3tlwD1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (develop294)
CRRM_1e3tlwC1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (develop294)
BRRM_1e3tlwB1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (develop294)
ARRM_1e3tlwA1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
E1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
D2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
D1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
C1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
B2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
B1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
A2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
A1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Glr4197 protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A, B, C, D, E
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A, B, C, D, E
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A, B, C, D, E
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR006201Neurotransmitter-gated ion-channelFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneAlpha-helical polytopicPentameric ligand-gated ion channelsProkaryotic pentameric ligand-gated ion channels

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD