3UE0
Crystal structure of Acinetobacter baumannii PBP1a in complex with Aztreonam
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8101864 | 3001604 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | NfeD domain-like | 8101860 | 3000416 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NfeD domain-like | 8101860 | 3000416 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-lactamase/transpeptidase-like | 8101864 | 3001604 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PCB_OB | e3ue0A1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PCB_OB | ECOD (1.6) |
A | Transpeptidase_1st_1 | e3ue0A2 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st_1 | ECOD (1.6) |
A | Transpeptidase_2nd | e3ue0A3 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd | ECOD (1.6) |
A | Transgly | e3ue0A4 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Transgly | ECOD (1.6) |
B | PCB_OB | e3ue0B1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PCB_OB | ECOD (1.6) |
B | Transpeptidase_1st_1 | e3ue0B2 | A: alpha complex topology | X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_1st_1 | ECOD (1.6) |
B | Transpeptidase_2nd | e3ue0B3 | A: a+b three layers | X: Profilin-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins (From Topology) | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: Transpeptidase_2nd | ECOD (1.6) |
B | Transgly | e3ue0B4 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Transgly | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (4.3.0) |
A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
B | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (4.3.0) |
B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00912 | Transglycosylase (Transgly) | Transglycosylase | - | Family | |
PF00905 | Penicillin binding protein transpeptidase domain (Transpeptidase) | Penicillin binding protein transpeptidase domain | The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family. | Domain | |
PF17092 | Penicillin-binding protein OB-like domain (PCB_OB) | Penicillin-binding protein OB-like domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031376 | Penicillin-binding protein, OB-like domain | Domain | |
IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
IPR050396 | Glycosyltransferase 51/Transpeptidase | Family | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily | |
IPR001264 | Glycosyl transferase, family 51 | Domain | |
IPR036950 | Penicillin binding protein transglycosylase domain | Homologous Superfamily | |
IPR001460 | Penicillin-binding protein, transpeptidase | Domain |