3UX9 | pdb_00003ux9

Structural insights into a human anti-IFN antibody exerting therapeutic potential for systemic lupus erythematosus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyInterferons/interleukin-10 (IL-10) 8070376 4000854 SCOP2 (2022-06-29)
ASCOP2 Superfamily4-helical cytokines 8070377 3001717 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3ux9B3 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: Ig_2F:ECOD (20:10:01)
De3ux9D5 A: Subtilisin-likeX: Subtilisin-likeH: Subtilisin-likeT: Ig_2F:ECOD (20:10:01)
Ae3ux9A1 A: cradle loop barrelX: RIFT-relatedH: acid proteaseT: InterferonF:ECOD (20:10:01)
Ce3ux9C2 A: Fusion glycoprotein F2X: Fusion glycoprotein F2H: Fusion glycoprotein F2T: Ribosomal_L12_NF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)
C1.20.1250.10 Mainly Alpha Up-down Bundle Growth Hormone Chain: ACATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B, D
scFv, anti-IFN V-LAMBDA-VH Homo sapiens (human) IGLV1-44*01, IGLJ3*02, IGHV3-23*04, IGHJ4*01, IGHJ4*02, IGHJ4*03 V-DOMAIN V-LAMBDA, V-DOMAIN VH IG SCFV-LAMBDA-HEAVY IMGT (202609-0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR009079Four-helical cytokine-like, coreHomologous Superfamily
A, C
IPR000471Interferon alpha/beta/deltaFamily