3VW2 | pdb_00003vw2

Crystal Strucuture of The Berberine-bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DArme3vw2D1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: ArmECOD (develop294)
CArme3vw2C1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: ArmECOD (develop294)
BArme3vw2B1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: ArmECOD (develop294)
AArme3vw2A1 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: ArmECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
C1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
B1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
A1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Putative regulatory protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR023772DNA-binding HTH domain, TetR-type, conserved siteConserved Site
A, B, C, D
IPR009057Homedomain-like superfamilyHomologous Superfamily
A, B, C, D
IPR050109HTH-type, TetR-like transcriptional regulatorFamily
A, B, C, D
IPR001647DNA-binding HTH domain, TetR-typeDomain