Annotations: 3ODA

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	zf-PARP	e3odaA1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
B	zf-PARP	e3odaB1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
D	zf-PARP	e3odaD1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
F	zf-PARP	e3odaF1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
H	zf-PARP	e3odaH1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
C	zf-PARP	e3odaC1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
E	zf-PARP	e3odaE1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)
G	zf-PARP	e3odaG1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: PARP-type zinc finger	F: zf-PARP	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
B	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
D	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
F	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
H	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
C	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
E	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)
G	3.30.1740.10	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Zinc finger, PARP-type	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Identifier	Description	Comments	Source
A, B, C, D, E, F, G, H A, B, C, D, E, F, G, H	PF00645	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region (zf-PARP)	Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region	Poly(ADP-ribose) polymerase is an important regulatory component of the cellular response to DNA damage. The amino-terminal region of Poly(ADP-ribose) polymerase consists of two PARP-type zinc fingers. This region acts as a DNA nick sensor.	Domain

Gene Product Annotation Gene Product Annotation

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, F, G, H A, B, C, D, E, F, G, H	Poly [ADP-ribose] polymerase 1	nucleic acid binding DNA binding binding organic cyclic compound binding heterocyclic compound binding protein binding enzyme binding histone deacetylase binding identical protein binding catalytic activity transferase activity glycosyltransferase activity pentosyltransferase activity NAD DNA ADP-ribosyltransferase activity NAD+ ADP-ribosyltransferase activity catalytic activity, acting on a protein NAD+-protein ADP-ribosyltransferase activity transcription factor binding nuclear receptor binding nuclear estrogen receptor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding kinase binding protein kinase binding SMAD binding R-SMAD binding RNA binding zinc ion binding ion binding cation binding metal ion binding transition metal ion binding	response to endogenous stimulus cellular process response to organic substance response to organonitrogen compound response to chemical response to stimulus cellular response to stimulus cellular response to chemical stimulus cellular response to organic substance cellular response to organonitrogen compound cellular response to endogenous stimulus response to peptide cellular response to peptide response to nitrogen compound cellular response to nitrogen compound response to oxygen-containing compound cellular response to oxygen-containing compound response to amyloid-beta cellular response to amyloid-beta response to hormone response to insulin cellular response to insulin stimulus cellular response to hormone stimulus response to peptide hormone cellular response to peptide hormone stimulus response to radiation response to UV response to light stimulus response to abiotic stimulus cellular response to UV cellular response to abiotic stimulus cellular response to radiation cellular response to light stimulus cellular response to environmental stimulus response to inorganic substance response to metal ion response to zinc ion cellular response to inorganic substance cellular response to metal ion cellular response to zinc ion cell differentiation developmental process myofibroblast differentiation regulation of cell differentiation positive regulation of cell differentiation positive regulation of biological process positive regulation of cellular process cellular developmental process regulation of biological process regulation of developmental process regulation of cellular process positive regulation of developmental process biological regulation regulation of myofibroblast differentiation positive regulation of myofibroblast differentiation cell death neuron death regulation of neuron death positive regulation of neuron death positive regulation of DNA binding positive regulation of molecular function regulation of binding positive regulation of binding regulation of DNA binding regulation of molecular function regulation of transcription regulatory region DNA binding positive regulation of transcription regulatory region DNA binding regulation of catalytic activity response to organic cyclic compound response to corticosteroid response to lipid response to steroid hormone response to mineralocorticoid response to alcohol response to ketone response to aldosterone response to ionizing radiation response to gamma radiation	membrane cellular anatomical entity intracellular anatomical structure cytoplasm mitochondrion organelle membrane-bounded organelle intracellular organelle intracellular membrane-bounded organelle nucleus nucleoplasm nuclear body membrane-enclosed lumen nuclear lumen organelle lumen intracellular organelle lumen nuclear envelope endomembrane system organelle envelope envelope nucleolus non-membrane-bounded organelle intracellular non-membrane-bounded organelle protein-containing complex protein-DNA complex chromosome site of DNA damage site of double-strand break transcription regulator complex
I, J, K, L, M, N, O, P I, J, K, L, M, N, O, P	5'-D(GPCPCPTPGPCPAPGPGPC)-3'	none	none	none

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.