Structure of Engineered Single Domain ICAM-1 D1 with High-Affinity aL Integrin I Domain of Native C-Terminal Helix Conformation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| BA [auth b] | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | vWA-like | 8042676 | 3000832 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| AA [auth a] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z | e3tcxZ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| X | e3tcxX1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| V | e3tcxV1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| T | e3tcxT1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| R | e3tcxR1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| P | e3tcxP1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| N | e3tcxN1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| L | e3tcxL1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| J | e3tcxJ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| H | e3tcxH1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| F | e3tcxF1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| D | e3tcxD1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| BA [auth b] | e3tcxb1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| B | e3tcxB1 | A: Cystatin-like | X: Immunoglobulin-related | H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | T: E1_DerP2_DerF2 | F: | ECOD (20:10:01) | |
| Y | e3tcxY1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| W | e3tcxW1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| U | e3tcxU1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| S | e3tcxS1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| Q | e3tcxQ1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| O | e3tcxO1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| M | e3tcxM1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| K | e3tcxK1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| I | e3tcxI1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| G | e3tcxG1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| E | e3tcxE1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| C | e3tcxC1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| AA [auth a] | e3tcxa1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Pkinase, APH | F: | ECOD (20:10:01) | |
| A | e3tcxA1 | A: Cystatin-like | X: sensor domains | H: sensor domains | T: Lipocalin_7 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00092 | von Willebrand factor type A domain (VWA) | von Willebrand factor type A domain | Domain | ||
| PF03921 | Intercellular adhesion molecule (ICAM), N-terminal domain (ICAM_N) | Intercellular adhesion molecule (ICAM), N-terminal domain | ICAMs normally functions to promote intercellular adhesion and signalling. However, The N-terminal domain of the receptor binds to the rhinovirus 'canyon' surrounding the icosahedral 5-fold axes, during the viral attachment process [1]. This family ... | Domain |














