4AGS | pdb_00004ags

Leishmania TDR1 - a unique trimeric glutathione transferase

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Thioredoxin-like	8093296	3000031	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Thioredoxin-like	8093297	3000031	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GST C-terminal domain-like	8093293	3000305	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GST C-terminal domain-like	8093292	3000305	SCOP2B (2022-06-29)
B	SCOP2 Family	Glutathione S-transferase (GST), C-terminal domain	8046268	4000976	SCOP2 (2022-06-29)
B	SCOP2 Family	Glutathione S-transferase (GST), C-terminal domain	8093291	4000976	SCOP2 (2022-06-29)
B	SCOP2 Family	Glutathione S-transferase (GST), N-terminal domain	8093294	4000472	SCOP2 (2022-06-29)
B	SCOP2 Family	Glutathione S-transferase (GST), N-terminal domain	8093295	4000472	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	GST C-terminal domain-like	8093292	3000305	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	GST C-terminal domain-like	8093293	3000305	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Thioredoxin-like	8093296	3000031	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Thioredoxin-like	8093297	3000031	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Thioredoxin-like	8093296	3000031	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Thioredoxin-like	8093297	3000031	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GST C-terminal domain-like	8093292	3000305	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GST C-terminal domain-like	8093293	3000305	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	DSBA	e4agsC9	A: alpha bundles	X: Glutamine synthetase-like	H: Glutamine synthetase/guanido kinase	T: Glutamine synthetase/guanido kinase	F: DSBA	ECOD (develop294)
B	Chorismate_bind	e4agsB25	A: alpha bundles	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Chorismate_bind	ECOD (develop294)
A	GST_N_2	e4agsA1	A: alpha bundles	X: Flavodoxin-like	H: SH3	T: SH3	F: GST_N_2	ECOD (develop294)
A	PK_Tyr_Ser-Thr	e4agsA3	A: alpha bundles	X: Flavodoxin-like	H: SH3	T: SH3	F: PK_Tyr_Ser-Thr	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
C	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (4.3.0)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
A	1.20.1050.10	Mainly Alpha	Up-down Bundle	Glutathione S-transferase Yfyf (Class Pi)	Chain A, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF13409	Glutathione S-transferase, N-terminal domain (GST_N_2)	Glutathione S-transferase, N-terminal domain	This family is closely related to Pfam:PF02798.	Domain
A, B, C	PF16865	Glutathione S-transferase, C-terminal domain (GST_C_5)	Glutathione S-transferase, C-terminal domain	Leishmania major and Trypanosoma cruzi glutathione-S-transferase (GST) has undergone gene duplication, diversification, and gene fusion leading to an four domain enzyme which contains two repeats of a GST N-terminal domain followed by a GST C-termina ...	Leishmania major and Trypanosoma cruzi glutathione-S-transferase (GST) has undergone gene duplication, diversification, and gene fusion leading to an four domain enzyme which contains two repeats of a GST N-terminal domain followed by a GST C-terminal domain [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	THIOL-DEPENDENT REDUCTASE 1	identical protein binding protein binding binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR011767	Glutaredoxin active site	Active Site
A, B, C	IPR050983	Glutathione S-transferase Omega/HSP26	Family
A, B, C	IPR010987	Glutathione S-transferase, C-terminal-like	Domain
A, B, C	IPR036282	Glutathione S-transferase, C-terminal domain superfamily	Homologous Superfamily
A, B, C	IPR004045	Glutathione S-transferase, N-terminal	Domain
A, B, C	IPR041695	Glutathione S-transferase, C-terminal domain	Domain
A, B, C	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B, C	IPR040079	Glutathione transferase family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.