4B8C
nuclease module of the yeast Ccr4-Not complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribonuclease H-like | 8041933 | 3000143 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribonuclease H-like | 8041933 | 3000143 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribonuclease H-like | 8041933 | 3000143 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribonuclease H-like | 8041933 | 3000143 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ARM repeat-like | 8053826 | 3000116 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | ARM repeat-like | 8053826 | 3000116 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ARM repeat-like | 8053826 | 3000116 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ARM repeat-like | 8053826 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CAF1 | e4b8cA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: CAF1 | ECOD (1.6) |
C | CAF1 | e4b8cC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: CAF1 | ECOD (1.6) |
E | CAF1 | e4b8cE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: CAF1 | ECOD (1.6) |
F | CAF1 | e4b8cF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: CAF1 | ECOD (1.6) |
B | CNOT1_CAF1_bind | e4b8cB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: CNOT1_CAF1_bind | ECOD (1.6) |
G | CNOT1_CAF1_bind | e4b8cG2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: CNOT1_CAF1_bind | ECOD (1.6) |
H | CNOT1_CAF1_bind | e4b8cH2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: CNOT1_CAF1_bind | ECOD (1.6) |
I | CNOT1_CAF1_bind | e4b8cI2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: CNOT1_CAF1_bind | ECOD (1.6) |
D | LRR_8_3 | e4b8cD1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_3 | ECOD (1.6) |
D | Exo_endo_phos | e4b8cD2 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
J | LRR_8_1 | e4b8cJ2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
K | LRR_8_3 | e4b8cK1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_3 | ECOD (1.6) |
L | LRR_8_1 | e4b8cL1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04857 | CAF1 family ribonuclease (CAF1) | CAF1 family ribonuclease | - | Family | |
PF16415 | CCR4-NOT transcription complex subunit 1 CAF1-binding domain (CNOT1_CAF1_bind) | CCR4-NOT transcription complex subunit 1 CAF1-binding domain | - | Repeat | |
PF13855 | Leucine rich repeat (LRR_8) | Leucine rich repeat | - | Repeat |