V. cholera biofilm scaffolding protein RbmA in complex with 18-crown- 6
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | BT_3987-like_N | e4beiA3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
| C | BT_3987-like_N | e4beiC3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
| D | V-set | e4beiD3 | A: alpha arrays | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: V-set | ECOD (v295.2) |
| E | BT_3987-like_N | e4beiE3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
| F | BT_3987-like_N | e4beiF3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
| G | BT_3987-like_N | e4beiG3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
| H | V-set | e4beiH3 | A: alpha arrays | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: V-set | ECOD (v295.2) |
| B | BT_3987-like_N | e4beiB3 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: BT_3987-like_N | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| C | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| D | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| E | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| F | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| G | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| H | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| B | 2.60.40.3880 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22021 | RbmA-like, FnIII domain (RbmA-like_FnIII) | RbmA-like, FnIII domain | This entry represents both fibronectin type III (FnIII) domains found in RbmA protein from Vibrio cholerae (Swiss:Q9KTH4), a biofilm matrix protein essential for both maintenance of rugose colony morphology and development of wild-type biofilm archit ... | Domain |














