4BJ1
Crystal structure of Saccharomyces cerevisiae RIF2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07949 | e4bj1A3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: EUF07949 | ECOD (1.6) |
A | EUF08601 | e4bj1A2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: EUF08601 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.1650 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | CATH (4.3.0) | |
A | 3.40.50.12060 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21450 | RIF2, AAA+ lid domain (RIF2_lid) | RIF2, AAA+ lid domain | RIF2 is involved in transcriptional silencing and telomere length regulation [1]. It belongs to the ATPase family associated with diverse cellular activities. This domain represents the alpha-helical AAA+ lid domain described in [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049045 | RIF2, AAA+ lid domain | Domain | |
IPR049044 | RIF2, ASCE domain | Domain |