Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyC-type lectin-like8035760 3001261 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEGF/Laminin-like8035761 3000412 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyC-type lectin-like8035760 3001261 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEGF/Laminin-like8035761 3000412 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALectin_Ce4c16A1 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
AhEGFe4c16A2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGFECOD (1.6)
ASushie4c16A4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: Complement control module/SCR domainF: SushiECOD (1.6)
BLectin_Ce4c16B2 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: C-type lectin-likeF: Lectin_CECOD (1.6)
BhEGFe4c16B1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGFECOD (1.6)
BSushie4c16B4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: Complement control module/SCR domainF: SushiECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
A2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
A2.10.70.10 Mainly Beta Ribbon Complement Module domain 1CATH (4.3.0)
B3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
B2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
B2.10.70.10 Mainly Beta Ribbon Complement Module domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00008EGF-like domain (EGF)EGF-like domainThere is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.
Domain
A, B
PF00084Sushi repeat (SCR repeat) (Sushi)Sushi repeat (SCR repeat)- Domain
A, B
PF00059Lectin C-type domain (Lectin_C)Lectin C-type domainThis family includes both long and short form C-typeDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
E-SELECTIN