4F20 | pdb_00004f20

Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e4f20A5	A: Fusion glycoprotein F2	X: Fusion glycoprotein F2	H: Fusion glycoprotein F2	T: SpaA	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.1280	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	2.60.40.1290	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth Q]	peptide from Dermokine	-	membrane organization cornified envelope assembly membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly plasma membrane organization cellular process cellular component organization or biogenesis endomembrane system organization	cellular anatomical structure extracellular region extracellular space
A	Clumping factor B	-	cell adhesion cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth Q]	IPR033541	Dermokine	Family
A	IPR050972	Serine-aspartate repeat-containing protein-like	Family
A	IPR005877	YSIRK Gram-positive signal peptide	Domain
A	IPR008966	Adhesion domain superfamily	Homologous Superfamily
A	IPR011252	Fibrogen-binding domain 1	Homologous Superfamily
A	IPR011266	Fibrinogen-binding domain 2	Domain
A	IPR019931	LPXTG cell wall anchor motif	Conserved Site
A	IPR041171	SDR-like Ig domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth Q]	Pharos: Q6E0U4	breast cancer interstitial cystitis ovarian cancer sinusitis breast fibroadenoma malignant ependymoma pancreatic ductal adenocarcinoma colorectal cancer nasopharyngeal carcinoma pancreatic intraductal papillary-mucinous carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.