Structure analysis of Geranyl diphosphate methyltransferase in complex with GPP and sinefungin


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LCupin_2e4f86L3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
KFRB_dome4f86K1 A: alpha arraysX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v295.2)
JCupin_2e4f86J3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
ICupin_2e4f86I3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
HFRB_dome4f86H1 A: alpha arraysX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v295.2)
GFRB_dome4f86G1 A: alpha arraysX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v295.2)
FFRB_dome4f86F1 A: alpha arraysX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v295.2)
ECupin_2e4f86E3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
DMethyltr_RsmB-Fe4f86D2 A: alpha arraysX: POZ domainH: POZ domainT: POZ domainF: Methyltr_RsmB-FECOD (v295.2)
CCupin_2e4f86C3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
BCupin_2e4f86B3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)
ACupin_2e4f86A3 A: alpha arraysX: DEATH domainH: omega toxin-relatedT: Scorpion toxin-likeF: Cupin_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR050447Erg6/SMT methyltransferaseFamily
A, B, C, D, E
IPR049645Geranyl diphosphate 2-C-methyltransferaseFamily
A, B, C, D, E
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily