4F93
Brr2 Helicase Region S1087L, Mg-ATP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Brl domain-like | 8036193 | 3000115 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | E set domains | 8055093 | 3000070 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | Sec63_3rd | e4f93B50 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sec63_3rd | ECOD (1.6) |
A [auth B] | KOG0952 | e4f93B48 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KOG0952 | ECOD (1.6) |
A [auth B] | Sec63_2nd_1 | e4f93B54 | A: alpha arrays | X: HhH/H2TH | H: SAM-like subdomain in Sec63-like proteins (From Topology) | T: SAM-like subdomain in Sec63-like proteins | F: Sec63_2nd_1 | ECOD (1.6) |
A [auth B] | Sec63_2nd | e4f93B47 | A: alpha arrays | X: HhH/H2TH | H: SAM-like subdomain in Sec63-like proteins (From Topology) | T: SAM-like subdomain in Sec63-like proteins | F: Sec63_2nd | ECOD (1.6) |
A [auth B] | Sec63_1st | e4f93B52 | A: alpha arrays | X: Sec63 N-terminal subdomain-like (From Topology) | H: Sec63 N-terminal subdomain-like (From Topology) | T: Sec63 N-terminal subdomain-like | F: Sec63_1st | ECOD (1.6) |
A [auth B] | DEAD_1 | e4f93B57 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_1 | ECOD (1.6) |
A [auth B] | Helicase_C_5 | e4f93B58 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_5 | ECOD (1.6) |
A [auth B] | DEAD_1,KOG0951_2nd | e4f93B53 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DEAD_1,KOG0951_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
A [auth B] | 1.10.3380.10 | Mainly Alpha | Orthogonal Bundle | Sec63 N-terminal domain-like fold | Sec63 N-terminal domain-like domain | CATH (4.3.0) |
A [auth B] | 1.10.150.20 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
A [auth B] | 2.60.40.150 | Mainly Beta | Sandwich | Immunoglobulin-like | C2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF02889 | Sec63 Brl domain (Sec63) | Sec63 Brl domain | - | Family |
A [auth B] | PF00270 | DEAD/DEAH box helicase (DEAD) | DEAD/DEAH box helicase | Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ... | Domain |
A [auth B] | PF00271 | Helicase conserved C-terminal domain (Helicase_C) | Helicase conserved C-terminal domain | The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR048863 | Pre-mRNA-splicing helicase BRR2-like, plug domain | Domain |
A [auth B] | IPR041094 | Brr2, N-terminal helicase PWI domain | Domain |
A [auth B] | IPR004179 | Sec63 domain | Domain |
A [auth B] | IPR014756 | Immunoglobulin E-set | Homologous Superfamily |
A [auth B] | IPR011545 | DEAD/DEAH box helicase domain | Domain |
A [auth B] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A [auth B] | IPR050474 | Helicase Hel308/SKI2-like | Family |
A [auth B] | IPR001650 | Helicase, C-terminal domain-like | Domain |
A [auth B] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
A [auth B] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR035892 | C2 domain superfamily | Homologous Superfamily |