Crystal structure of the ydhK protein from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR518A.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALongine4fibA1 A: alpha arraysX: Long alpha-hairpinH: C-terminal UvrC-binding domain of UvrBT: C-terminal UvrC-binding domain of UvrBF: LonginECOD (v295.2)
AGlyco_hydro_18e4fibA2 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: double psiF: Glyco_hydro_18ECOD (v295.2)
BLongine4fibB1 A: alpha arraysX: Long alpha-hairpinH: C-terminal UvrC-binding domain of UvrBT: C-terminal UvrC-binding domain of UvrBF: LonginECOD (v295.2)
BGlyco_hydro_18e4fibB2 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: double psiF: Glyco_hydro_18ECOD (v295.2)
CLongine4fibC1 A: alpha arraysX: Long alpha-hairpinH: C-terminal UvrC-binding domain of UvrBT: C-terminal UvrC-binding domain of UvrBF: LonginECOD (v295.2)
CGlyco_hydro_18e4fibC2 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: double psiF: Glyco_hydro_18ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
A2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
B2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
B2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)
C2.30.30.1130 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
C2.40.10.520 Mainly Beta Beta Barrel Thrombin, subunit H CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF07563Protein of unknown function (DUF1541) (DUF1541)Protein of unknown function (DUF1541)- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR011438Domain of unknown function DUF1541Domain