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 4FZX | pdb_00004fzx

Exonuclease X in complex with 3' overhanging duplex DNA

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyRibonuclease H-like 8098424 3000143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibonuclease H-like 8098424 3000143 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPEPCK_Ne4fzxD1 A: alpha arraysX: PBZ domainH: PBZ domainT: PBZ domainF: PEPCK_NECOD (v295.2)
CPEPCK_Ne4fzxC1 A: alpha arraysX: PBZ domainH: PBZ domainT: PBZ domainF: PEPCK_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
C3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF00929Exonuclease (RNase_T)ExonucleaseThis family includes a variety of exonuclease proteins, such as ribonuclease T and the epsilon subunit of DNA polymerase III.; Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Exodeoxyribonuclease 10
B [auth A]DNA (5'-D(P*CP*GP*GP*AP*TP*CP*CP*AP*CP*AP*AP*TP*GP*AP*CP*CP*T)-3')---
A [auth B]DNA (5'-D(P*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C, D
IPR036397Ribonuclease H superfamilyHomologous Superfamily
C, D
IPR013520Ribonuclease H-like domainDomain
C, D
IPR046768Exodeoxyribonuclease X-like, C-terminalDomain
C, D
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily