Crystal structure of human IL-1beta in complex with therapeutic antibody binding fragment of gevokizumab
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Thera-SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth L] | Y_phosphatase | e4g6mL1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: Y_phosphatase | ECOD (v294.1) |
| B [auth H] | Rrf2 | e4g6mH1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (v294.1) |
| A | Y_phosphatase | e4g6mA1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: Y_phosphatase | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| C [auth L] | INN name | L-KAPPA | Chimeric (chimeric) | IGKV10-96*01, IGKV10-96*02, IGKJ1*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202613-0) |
| B [auth H] | INN name | VH-CH1 | Chimeric (chimeric) | IGHV8-12*01, IGHV8-8*01, IGHJ5*01, IGHG1*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202613-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth L] | Light Chain | IGKV1 | Kappa | interleukin-1 beta | SAbDab (2026-04-10) |
| B [auth H] | Heavy Chain | IGHV4 | - | interleukin-1 beta | SAbDab (2026-04-10) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
| Chain | Name | Target | Provenance Source |
|---|---|---|---|
| C [auth L] | Gevokizumab | IL1B | Therapeutic SAbDab (2026-04-10) |
| B [auth H] | Gevokizumab | IL1B | Therapeutic SAbDab (2026-04-10) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00340 | Interleukin-1 / 18 (IL1) | Interleukin-1 / 18 | This family includes interleukin-1 and interleukin-18. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020877 | Interleukin-1 conserved site | Conserved Site | |
| IPR008996 | Cytokine IL1/FGF | Homologous Superfamily | |
| IPR000975 | Interleukin-1 family | Family | |
| IPR003502 | Interleukin-1 propeptide | Domain |














