Structure of the SOCS2-Elongin BC complex bound to an N-terminal fragment of Cullin5
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | POZ domain | 8034753 | 3000894 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Ubiquitin-like | 8041177 | 3000157 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | SH2 domain | 8032739 | 3000197 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | SOCS box-like | 8032737 | 3001002 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | TraQ_transposon | e4jghD1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: EGF-related | T: Complement control module/SCR domain | F: TraQ_transposon | ECOD (develop294) |
| C | TraQ_transposon | e4jghC1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: EGF-related | T: Complement control module/SCR domain | F: TraQ_transposon | ECOD (develop294) |
| B | TraQ_transposon | e4jghB1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: EGF-related | T: Complement control module/SCR domain | F: TraQ_transposon | ECOD (develop294) |
| A | TraQ_transposon | e4jghA1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: EGF-related | T: Complement control module/SCR domain | F: TraQ_transposon | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.20.1310.10 | Mainly Alpha | Up-down Bundle | 5 helical Cullin repeat like | Cullin Repeats | CATH (4.3.0) |
| C | 3.30.710.10 | Alpha Beta | 2-Layer Sandwich | Potassium Channel Kv1.1 | Chain A | CATH (4.3.0) |
| B | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
| A | 3.30.505.10 | Alpha Beta | 2-Layer Sandwich | SHC Adaptor Protein | SH2 domain | CATH (4.3.0) |
| A | 1.10.750.20 | Mainly Alpha | Orthogonal Bundle | Elongin C | Chain C, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00888 | Cullin alpha solenoid domain (Cullin) | Cullin alpha solenoid domain | - | Repeat | |
| PF03931 | Skp1 family, tetramerisation domain (Skp1_POZ) | Skp1 family, tetramerisation domain | Domain | ||
| PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
| PF00017 | SH2 domain (SH2) | SH2 domain | Domain | ||
| PF07525 | SOCS box (SOCS_box) | SOCS box | The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases. | Domain |














