Structure of HLA-A2 in complex with D76N b2m mutant and NY-ESO1 double mutant
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z [auth R] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| W [auth P] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| T [auth N] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| Q [auth L] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| OA [auth b] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| N [auth J] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| LA [auth Z] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| K [auth H] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| IA [auth X] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| FA [auth V] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| E [auth D] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| CA [auth T] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| Y [auth Q] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| Y [auth Q] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| V [auth O] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| V [auth O] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| S [auth M] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| S [auth M] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| P [auth K] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| P [auth K] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| NA [auth a] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| NA [auth a] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| M [auth I] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| M [auth I] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| KA [auth Y] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| KA [auth Y] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| J [auth G] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| J [auth G] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| HA [auth W] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| HA [auth W] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| EA [auth U] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| EA [auth U] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| BA [auth S] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
| BA [auth S] | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | MHC antigen-recognition domain | 8033653 | 3000521 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054579 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z [auth R] | e4l3cR1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| W [auth P] | e4l3cP1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| T [auth N] | e4l3cN1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| Q [auth L] | e4l3cL1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| OA [auth b] | e4l3cb1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| N [auth J] | e4l3cJ1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| LA [auth Z] | e4l3cZ1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| K [auth H] | e4l3cH1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| IA [auth X] | e4l3cX1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| H [auth F] | e4l3cF1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| FA [auth V] | e4l3cV1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| E [auth D] | e4l3cD1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| CA [auth T] | e4l3cT1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| B | e4l3cB1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| Y [auth Q] | e4l3cQ1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| V [auth O] | e4l3cO1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| S [auth M] | e4l3cM1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| P [auth K] | e4l3cK1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| NA [auth a] | e4l3ca1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| M [auth I] | e4l3cI1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| KA [auth Y] | e4l3cY1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| J [auth G] | e4l3cG1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| HA [auth W] | e4l3cW1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| G [auth E] | e4l3cE1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| EA [auth U] | e4l3cU1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| D [auth C] | e4l3cC1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| BA [auth S] | e4l3cS1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) | |
| A | e4l3cA1 | A: beta-Grasp | X: Ubiquitin-related | H: Ubiquitin-like | T: OMPdecase | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| MH1 HLA-B*9234 | B2M | Homo sapiens (human) | B2M*01, B2M*02 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202609-0) | |
| MH1 HLA-B*9234 | I-ALPHA | Homo sapiens (human) | HLA-A*0201, HLA-A*0203, HLA-A*0204, HLA-A*0207, HLA-A*0209, HLA-A*0212, HLA-A*0213, HLA-A*0216, HLA-A*0217, HLA-A*0218, HLA-A*0219, HLA-A*0222, HLA-A*0224, HLA-A*0225, HLA-A*0226, HLA-A*0227, HLA-A*0233, HLA-A*0236, HLA-A*0237, HLA-A*0238, HLA-A*0239, HLA-A*0240, HLA-A*0249, HLA-A*0252, HLA-A*0266, HLA-A*0289, HLA-A*0271, HLA-A*0268, HLA-A*0274, HLA-A*0258, HLA-A*0280, HLA-A*0265, HLA-A*0286, HLA-A*0277, HLA-A*0260, HLA-A*0273, HLA-A*0285, HLA-A*0264, HLA-A*0275, HLA-A*0267, HLA-A*0295, HLA-A*0297, HLA-A*9201, HLA-A*0296, HLA-A*0293, HLA-A*9221, HLA-A*9231, HLA-A*9232, HLA-A*9214, HLA-A*9202, HLA-A*9210, HLA-A*9205, HLA-A*9217, HLA-A*9211, HLA-A*9204, HLA-A*9230, HLA-A*9234, HLA-A*9218, HLA-A*9247, HLA-A*9249, HLA-A*9251, HLA-A*9248, HLA-A*9256, HLA-A*9235, HLA-A*9252, HLA-A*9240, HLA-A*9253, HLA-A*9245, HLA-A*9277, HLA-A*9257, HLA-A*9271, HLA-A*9294, HLA-A*9264, HLA-A*9290, HLA-A*9266, HLA-A*9291, HLA-A*9289, HLA-A*9274, HLA-A*9262, HLA-A*9259, HLA-A*9263, HLA-A*9268, HLA-A*9288, HLA-A*9293, HLA-A*9287, HLA-A*9283, HLA-A*9267, HLA-A*9265, HLA-A*9282, HLA-A*9297, HLA-A*9298, HLA-A*9299 | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202609-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain |














