4O8M

Crystal structure of a trap periplasmic solute binding protein actinobacillus succinogenes 130z, target EFI-510004, with bound L-galactonate


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4o8ma_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Bd4o8mb_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Cd4o8mc_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Ed4o8me_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Fd4o8mf_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Hd4o8mh_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Dd4o8md_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)
Gd4o8mg_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Actinobacillus succinogenes 130Z ) [TaxId: 339671 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADctPe4o8mA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
BDctPe4o8mB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
CDctPe4o8mC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
EDctPe4o8mE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
FDctPe4o8mF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
HDctPe4o8mH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
DDctPe4o8mD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)
GDctPe4o8mG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: DctPECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF03480Bacterial extracellular solute-binding protein, family 7 (DctP)Bacterial extracellular solute-binding protein, family 7- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
TRAP dicarboxylate transporter, DctP subunit-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR018389TRAP transporter solute receptor DctPFamily
A, B, C, D, E
IPR038404TRAP transporter solute receptor DctP superfamilyHomologous Superfamily
A, B, C, D, E
IPR004682TRAP transporter solute receptor, DctP familyFamily