Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth C]SCOP2 FamilyClp1 N-terminal domain-like 8045804 4004697 SCOP2 (2022-06-29)
B [auth C]SCOP2 FamilyClp1 PNK domain-like 8045806 4004698 SCOP2 (2022-06-29)
B [auth C]SCOP2 FamilymRNA cleavage and polyadenylation factor CLP1, C-terminal domain-like 8048770 4006213 SCOP2 (2022-06-29)
B [auth C]SCOP2 SuperfamilycAMP-binding domain-like 8091491 3000084 SCOP2 (2022-06-29)
B [auth C]SCOP2 SuperfamilySimibi-like P-loop NTPases 8091490 3002018 SCOP2 (2022-06-29)
B [auth C]SCOP2 SuperfamilyClp1 C-terminal domain-like 8091489 3002513 SCOP2 (2022-06-29)
ASCOP2B SuperfamilySimibi-like P-loop NTPases 8091490 3002018 SCOP2B (2022-06-29)
ASCOP2B SuperfamilycAMP-binding domain-like 8091491 3000084 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClp1 C-terminal domain-like 8091489 3002513 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]Clp1e4oi4C3 A: beta barrelsX: Protein CLP1 C-terminal domain (From Topology)H: Protein CLP1 C-terminal domain (From Topology)T: Protein CLP1 C-terminal domainF: Clp1ECOD (1.6)
B [auth C]CLP1_N_1e4oi4C2 A: beta sandwichesX: jelly-rollH: Protein CLP1 jelly-roll domain (From Topology)T: Protein CLP1 jelly-roll domainF: CLP1_N_1ECOD (1.6)
B [auth C]CLP1_Pe4oi4C1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CLP1_PECOD (1.6)
AClp1e4oi4A3 A: beta barrelsX: Protein CLP1 C-terminal domain (From Topology)H: Protein CLP1 C-terminal domain (From Topology)T: Protein CLP1 C-terminal domainF: Clp1ECOD (1.6)
ACLP1_N_1e4oi4A2 A: beta sandwichesX: jelly-rollH: Protein CLP1 jelly-roll domain (From Topology)T: Protein CLP1 jelly-roll domainF: CLP1_N_1ECOD (1.6)
ACLP1_Pe4oi4A1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: CLP1_PECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth C]
PF06807Pre-mRNA cleavage complex II protein Clp1 (Clp1)Pre-mRNA cleavage complex II protein Clp1- Family
A,
B [auth C]
PF16573N-terminal beta-sandwich domain of polyadenylation factor (CLP1_N)N-terminal beta-sandwich domain of polyadenylation factor- Family
A,
B [auth C]
PF16575mRNA cleavage and polyadenylation factor CLP1 P-loop (CLP1_P)mRNA cleavage and polyadenylation factor CLP1 P-loopCLP1_P is the P-loop carrying domain of Clp1 mRNA cleavage and polyadenylation factor, Clp1, proteins in eukaryotes. Clp1 is essential for 3'-end processing of mRNAs. This region carries the P-loop suggesting it is the region that binds adenine or g ...CLP1_P is the P-loop carrying domain of Clp1 mRNA cleavage and polyadenylation factor, Clp1, proteins in eukaryotes. Clp1 is essential for 3'-end processing of mRNAs. This region carries the P-loop suggesting it is the region that binds adenine or guanine nucleotide [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth C]
mRNA cleavage and polyadenylation factor CLP1
C [auth B],
D,
E [auth U]
Protein PCF11