4PKN

Crystal structure of the football-shaped GroEL-GroES2-(ADPBeFx)14 complex containing substrate Rubisco


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth G]Cpn60_TCP1_1ste4pknG1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
A [auth G]Cpn60_TCP1_2nd_2e4pknG2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
A [auth G]Cpn60_TCP1_3rde4pknG3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
B [auth A]Cpn60_TCP1_1ste4pknA1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
B [auth A]Cpn60_TCP1_2nd_2e4pknA2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
B [auth A]Cpn60_TCP1_3rde4pknA3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
C [auth B]Cpn60_TCP1_1ste4pknB1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
C [auth B]Cpn60_TCP1_2nd_2e4pknB2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
C [auth B]Cpn60_TCP1_3rde4pknB3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
D [auth F]Cpn60_TCP1_1ste4pknF1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
D [auth F]Cpn60_TCP1_2nd_2e4pknF2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
D [auth F]Cpn60_TCP1_3rde4pknF3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
ECpn60_TCP1_1ste4pknE1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ECpn60_TCP1_2nd_2e4pknE2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
ECpn60_TCP1_3rde4pknE3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
F [auth C]Cpn60_TCP1_1ste4pknC1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
F [auth C]Cpn60_TCP1_2nd_2e4pknC2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
F [auth C]Cpn60_TCP1_3rde4pknC3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
G [auth D]Cpn60_TCP1_1ste4pknD1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
G [auth D]Cpn60_TCP1_2nd_2e4pknD2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
G [auth D]Cpn60_TCP1_3rde4pknD3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
O [auth K]Cpn60_TCP1_1ste4pknK1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
O [auth K]Cpn60_TCP1_2nd_2e4pknK2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
O [auth K]Cpn60_TCP1_3rde4pknK3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
P [auth J]Cpn60_TCP1_1ste4pknJ1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
P [auth J]Cpn60_TCP1_2nd_2e4pknJ2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
P [auth J]Cpn60_TCP1_3rde4pknJ3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
Q [auth I]Cpn60_TCP1_1ste4pknI1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
Q [auth I]Cpn60_TCP1_2nd_2e4pknI2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
Q [auth I]Cpn60_TCP1_3rde4pknI3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
R [auth L]Cpn60_TCP1_1ste4pknL1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
R [auth L]Cpn60_TCP1_2nd_2e4pknL2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
R [auth L]Cpn60_TCP1_3rde4pknL3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
S [auth M]Cpn60_TCP1_1ste4pknM1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
S [auth M]Cpn60_TCP1_2nd_2e4pknM2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
S [auth M]Cpn60_TCP1_3rde4pknM3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
T [auth H]Cpn60_TCP1_1ste4pknH1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
T [auth H]Cpn60_TCP1_2nd_2e4pknH2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
T [auth H]Cpn60_TCP1_3rde4pknH3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
U [auth N]Cpn60_TCP1_1ste4pknN1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
U [auth N]Cpn60_TCP1_2nd_2e4pknN2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2nd_2ECOD (1.6)
U [auth N]Cpn60_TCP1_3rde4pknN3 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_3rdECOD (1.6)
AA [auth 2]Cpn10e4pkn21 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
BA [auth 1]Cpn10e4pkn11 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
H [auth O]Cpn10e4pknO1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
I [auth P]Cpn10e4pknP1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
J [auth Q]Cpn10e4pknQ1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
K [auth U]Cpn10e4pknU1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
L [auth T]Cpn10e4pknT1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
M [auth R]Cpn10e4pknR1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
N [auth S]Cpn10e4pknS1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
V [auth X]Cpn10e4pknX1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
WCpn10e4pknW1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
X [auth V]Cpn10e4pknV1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
YCpn10e4pknY1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)
ZCpn10e4pknZ1 A: beta barrelsX: GroES-likeH: GroES-relatedT: GroESF: Cpn10ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth G]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
A [auth G]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
A [auth G]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
B [auth A]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
B [auth A]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
B [auth A]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
C [auth B]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
C [auth B]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
C [auth B]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
D [auth F]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
D [auth F]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
D [auth F]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
E3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
F [auth C]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
F [auth C]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
F [auth C]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
G [auth D]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
G [auth D]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
G [auth D]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
O [auth K]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
O [auth K]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
O [auth K]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
P [auth J]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
P [auth J]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
P [auth J]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
Q [auth I]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
Q [auth I]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
Q [auth I]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
R [auth L]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
R [auth L]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
R [auth L]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
S [auth M]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
S [auth M]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
S [auth M]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
T [auth H]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
T [auth H]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
T [auth H]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
U [auth N]1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
U [auth N]3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
U [auth N]3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
AA [auth 2]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
BA [auth 1]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
H [auth O]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
I [auth P]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
J [auth Q]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
K [auth U]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
L [auth T]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
M [auth R]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
N [auth S]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
V [auth X]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
W2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
X [auth V]2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
Y2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)
Z2.30.33.40 Mainly Beta Roll 10 Kd Chaperonin, Protein Cpn10 Chain OCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family
PF00166Chaperonin 10 Kd subunit (Cpn10)Chaperonin 10 Kd subunitThis family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
60 kDa chaperonin
10 kDa chaperonin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
IPR001844Chaperonin Cpn60/GroELFamily
IPR018370Chaperonin Cpn60, conserved siteConserved Site
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily
IPR018369Chaperonin GroES, conserved siteConserved Site
IPR011032GroES-like superfamilyHomologous Superfamily
IPR020818GroES chaperonin familyFamily
IPR037124GroES chaperonin superfamilyHomologous Superfamily