Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyZn-dependent exopeptidases 8053708 3000662 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCsd4 C-terminal domains 8053707 3002215 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCsd4 C-terminal domains 8046492 3002215 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M99_me4q6qA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Csd4 Ig-like domain (From Topology)T: Csd4 Ig-like domainF: Peptidase_M99_mECOD (1.6)
APeptidase_M99_Ce4q6qA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Csd4 Ig-like domain (From Topology)T: Csd4 Ig-like domainF: Peptidase_M99_CECOD (1.6)
AAstE_AspA_Ne4q6qA2 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Zn-dependent exopeptidases (From Topology)T: Zn-dependent exopeptidasesF: AstE_AspA_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17130beta-barrel domain of carboxypeptidase M99 (Peptidase_M99_m)beta-barrel domain of carboxypeptidase M99This is the central, beta-barrel, domain of the metallo-carboxypeptidase that maintains helical cell-shape in Helicobacter. It shows a novel fold. It has a highly positively charged surface which contributes to a high overall isoelectric point. A cal ...This is the central, beta-barrel, domain of the metallo-carboxypeptidase that maintains helical cell-shape in Helicobacter. It shows a novel fold. It has a highly positively charged surface which contributes to a high overall isoelectric point. A calcium-binding channel is formed from residues in the C-terminal Ig-like domain in conjunction with some of the long side-chains of residues from strands beta-14 and beta-18 of this domain [1].
Domain
PF17033Carboxypeptidase controlling helical cell shape catalytic (Peptidase_M99)Carboxypeptidase controlling helical cell shape catalyticThis is the peptidase domain of a D,L-carboxypeptidase. The active site residues are Arg86, Glu222 and the metal ligands, in the peptidase domain, are Gln46, Glu49 and His128 in UniProtKB:O25708. The protein binds many zinc ions and a calcium ion a ...This is the peptidase domain of a D,L-carboxypeptidase. The active site residues are Arg86, Glu222 and the metal ligands, in the peptidase domain, are Gln46, Glu49 and His128 in UniProtKB:O25708. The protein binds many zinc ions and a calcium ion and there are other metal binding sites. The catalytic activity is the release of m-Dpm from the peptide muramyl-Ala-gamma-D-Glu-m-Dpm; this is probably the precursor of the cell wall cross-linking peptide [1].
Domain
PF17129C-terminal domain of metallo-carboxypeptidase (Peptidase_M99_C)C-terminal domain of metallo-carboxypeptidaseC-terminal immunoglobulin-like domain of helical cell shape-determining peptidoglycan hydrolases, a metallo-carboxypeptidase. The structural elements of this domain form a Ca2+ binding-channel, the Ca2+ being co-ordinated by six ligand-atoms [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Conserved hypothetical secreted protein - -