4Q89 | pdb_00004q89

Crystal Structure of the CotA native enzyme

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4q89b2	All beta proteins	Cupredoxin-like	Cupredoxins	Multidomain cupredoxins	Spore coat protein A, CotA, middle domain	(Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ],	SCOPe (2.08)
B	d4q89b1	All beta proteins	Cupredoxin-like	Cupredoxins	Multidomain cupredoxins	Spore coat protein A, CotA, N- and C-terminal domain	(Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ],	SCOPe (2.08)
A	d4q89a2	All beta proteins	Cupredoxin-like	Cupredoxins	Multidomain cupredoxins	Spore coat protein A, CotA, middle domain	(Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ],	SCOPe (2.08)
A	d4q89a1	All beta proteins	Cupredoxin-like	Cupredoxins	Multidomain cupredoxins	Spore coat protein A, CotA, N- and C-terminal domain	(Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Cupredoxins	8032943	3000886	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cupredoxins	8032944	3000886	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cupredoxins	8032945	3000886	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cupredoxins	8032944	3000886	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cupredoxins	8032945	3000886	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cupredoxins	8032943	3000886	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e4q89B1	A: HTH	X: HTH	H: Three-helical HTH	T: Fe_bilin_red	F:	ECOD (20:10:01)
A		e4q89A1	A: HTH	X: HTH	H: Three-helical HTH	T: Fe_bilin_red	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
A	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00394	Multicopper oxidase (Cu-oxidase)	Multicopper oxidase	Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain.	Domain
A, B	PF07732	Multicopper oxidase (Cu-oxidase_3)	Multicopper oxidase	This entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Spore coat protein A	oxidoreductase activity catalytic activity cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding bilirubin oxidase activity oxidoreductase activity, acting on the CH-CH group of donors oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity, acting on diphenols and related substances as donors oxidoreductase activity catalytic activity cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding bilirubin oxidase activity oxidoreductase activity, acting on the CH-CH group of donors oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity, acting on diphenols and related substances as donors hydroquinone:oxygen oxidoreductase activity	sporulation resulting in formation of a cellular spore developmental process anatomical structure morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development sporulation	cellular anatomical structure outer membrane-bounded periplasmic space cell envelope periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008972	Cupredoxin	Homologous Superfamily
A, B	IPR001117	Multicopper oxidase, second cupredoxin domain	Domain
A, B	IPR011706	Multicopper oxidase, C-terminal	Domain
A, B	IPR045087	Multicopper oxidase	Family
A, B	IPR011707	Multicopper oxidase-like, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.