4RUT
crystal structure of murine cyclooxygenase-2 with 13-methyl-arachidonic Acid
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03098 | e4rutA2 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: PF03098 | ECOD (1.6) |
A | PF00008 | e4rutA1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF00008 | ECOD (1.6) |
B | PF03098 | e4rutB2 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: PF03098 | ECOD (1.6) |
B | PF00008 | e4rutB1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF00008 | ECOD (1.6) |
C | PF03098 | e4rutC2 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: PF03098 | ECOD (1.6) |
C | PF00008 | e4rutC1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF00008 | ECOD (1.6) |
D | PF03098 | e4rutD1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: PF03098 | ECOD (1.6) |
D | PF00008 | e4rutD2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF00008 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
B | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
B | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
C | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
C | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
D | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
D | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00008 | EGF-like domain (EGF) | EGF-like domain | There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... | Domain | |
PF03098 | Animal haem peroxidase (An_peroxidase) | Animal haem peroxidase | - | Domain |