Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
R [auth U]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068575 3000806 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068575 3000806 SCOP2B (2022-06-29)
Q [auth T]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8073735 3000770 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8073735 3000770 SCOP2B (2022-06-29)
P [auth S]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068577 3000797 SCOP2B (2022-06-29)
FSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8068577 3000797 SCOP2B (2022-06-29)
M [auth P]SCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8042105 3000966 SCOP2B (2022-06-29)
M [auth P]SCOP2B SuperfamilyTransmembrane di-heme cytochromes 8042108 3000517 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTransmembrane di-heme cytochromes 8042108 3000517 SCOP2B (2022-06-29)
CSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8042105 3000966 SCOP2B (2022-06-29)
T [auth W]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8097736 3000779 SCOP2B (2022-06-29)
JSCOP2 FamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8097735 4002059 SCOP2 (2022-06-29)
JSCOP2 SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8097736 3000779 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth V]Glyco_hydro_31_3rde4u3fV1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
IGlyco_hydro_31_3rde4u3fI1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
R [auth U]Glyco_hydro_31_3rde4u3fU1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
HGlyco_hydro_31_3rde4u3fH1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
Q [auth T]Glyco_hydro_31_3rde4u3fT1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
GGlyco_hydro_31_3rde4u3fG1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
P [auth S]Glyco_hydro_31_3rde4u3fS1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
FGlyco_hydro_31_3rde4u3fF1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
O [auth R]Peptidase_S74e4u3fR2 A: alpha bundlesX: Repetitive alpha hairpinsH: C2 domainT: C2 domainF: Peptidase_S74ECOD (develop294)
O [auth R]Glutaminasee4u3fR3 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: GlutaminaseECOD (develop294)
Ee4u3fE2 A: alpha bundlesX: Lipocalins/StreptavidinH: Fibronectin type I module-likeT: Fibronectin type I moduleF:ECOD (develop294)
N [auth Q]Glyco_hydro_31_3rde4u3fQ1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
DGlyco_hydro_31_3rde4u3fD1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
M [auth P]Glyco_hydro_31_3rde4u3fP1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
CGlyco_hydro_31_3rde4u3fC1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
L [auth O]Glyco_hydro_31_3rde4u3fO1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
BGlyco_hydro_31_3rde4u3fB1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
T [auth W]Glyco_hydro_31_3rde4u3fW1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
JGlyco_hydro_31_3rde4u3fJ1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
K [auth N]Glyco_hydro_31_3rde4u3fN1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)
AGlyco_hydro_31_3rde4u3fA1 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Glyco_hydro_31_3rdECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
S [auth V]2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex Chain ICATH (4.3.0)
I2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex Chain ICATH (4.3.0)
R [auth U]1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
H1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
Q [auth T]1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
G1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
P [auth S]1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
F1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
O [auth R]1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
O [auth R]2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
E1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
N [auth Q]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
N [auth Q]1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
D1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
D1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
M [auth P]1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
C1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
L [auth O]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
T [auth W]1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
J1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
K [auth N]3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
A3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E,
O [auth R]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E,
O [auth R]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
C,
M [auth P]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petDDomain
C,
M [auth P]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petBDomain
J,
T [auth W]
PF05365Cytochrome b-c1 complex subunit 9 (UCR_UQCRX_QCR9)Cytochrome b-c1 complex subunit 9- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I,
S [auth V]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
H,
R [auth U]
Cytochrome b-c1 complex subunit 6-
G,
Q [auth T]
Mitochondrial ubiquinol-cytochrome c reductase ubiquinone-binding protein qp-c-
F,
P [auth S]
Cytochrome b-c1 complex subunit 7-
E,
O [auth R]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
D,
N [auth Q]
Mitochondrial cytochrome c1, heme protein -
C,
M [auth P]
Cytochrome b
B,
L [auth O]
Mitochondrial ubiquinol-cytochrome-c reductase complex core protein 2 -
J,
T [auth W]
Mitochondrial ubiquinol-cytochrome c reductase 7.2 kda protein-
A,
K [auth N]
Mitochondrial ubiquinol-cytochrome-c reductase complex core protein i -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I,
S [auth V]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
I,
S [auth V]
IPR014349Rieske iron-sulphur proteinFamily
I,
S [auth V]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
I,
S [auth V]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
I,
S [auth V]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
I,
S [auth V]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
I,
S [auth V]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
I,
S [auth V]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
I,
S [auth V]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
H,
R [auth U]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
R [auth U]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
R [auth U]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
G,
Q [auth T]
IPR004205Cytochrome b-c1 complex subunit 8Family
G,
Q [auth T]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
F,
P [auth S]
IPR003197Cytochrome b-c1 complex subunit 7Family
F,
P [auth S]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
E,
O [auth R]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth R]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth R]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E,
O [auth R]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth R]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E,
O [auth R]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth R]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth R]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth R]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
D,
N [auth Q]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth Q]
IPR002326Cytochrome c1Family
D,
N [auth Q]
IPR009056Cytochrome c-like domainDomain
D,
N [auth Q]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
C,
M [auth P]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth P]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth P]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth P]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth P]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth P]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth P]
IPR030689Cytochrome bFamily
C,
M [auth P]
IPR005797Cytochrome b/b6, N-terminal domainDomain
B,
L [auth O]
IPR007863Peptidase M16, C-terminalDomain
B,
L [auth O]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth O]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
L [auth O]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
J,
T [auth W]
IPR008027Cytochrome b-c1 complex subunit 9Family
J,
T [auth W]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
A,
K [auth N]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth N]
IPR011765Peptidase M16, N-terminalDomain
A,
K [auth N]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth N]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
I,
S [auth V]
AME Parent Component: MET

I,
S [auth V]
UNK
C,
M [auth P]
FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891