4UER

40S-eIF1-eIF1A-eIF3-eIF3j translation initiation complex from Lachancea kluyveri


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 0]SCOP2 FamilyCold shock DNA-binding domain-like 8081502 4001909 SCOP2 (2022-06-29)
A [auth 0]SCOP2 SuperfamilyNucleic acid-binding proteins 8081503 3000135 SCOP2 (2022-06-29)
B [auth 1]SCOP2 FamilyCold shock DNA-binding domain-like 8063421 4001909 SCOP2 (2022-06-29)
B [auth 1]SCOP2 SuperfamilyNucleic acid-binding proteins 8063422 3000135 SCOP2 (2022-06-29)
E [auth 4]SCOP2 FamilyRibosomal S3Ae 8048441 4006095 SCOP2 (2022-06-29)
E [auth 4]SCOP2 SuperfamilyRibosomal S3Ae-like 8053213 3002166 SCOP2 (2022-06-29)
F [auth 5]SCOP2 FamilyRibosomal protein S26e 8048841 4006236 SCOP2 (2022-06-29)
F [auth 5]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053145 3000068 SCOP2 (2022-06-29)
H [auth 7]SCOP2 FamilyeS10-like 8051616 4007434 SCOP2 (2022-06-29)
H [auth 7]SCOP2 SuperfamilyWinged helix DNA-binding domain 8055719 3000034 SCOP2 (2022-06-29)
I [auth 8]SCOP2 FamilyRibosomal protein S25-like 8051330 4007308 SCOP2 (2022-06-29)
I [auth 8]SCOP2 SuperfamilyWinged helix DNA-binding domain 8090999 3000034 SCOP2 (2022-06-29)
L [auth B]SCOP2 FamilyRibosomal protein S2-like 8063825 4003744 SCOP2 (2022-06-29)
L [auth B]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8063826 3001397 SCOP2 (2022-06-29)
Q [auth G]SCOP2 FamilyRibosomal protein S7 8065994 4001112 SCOP2 (2022-06-29)
Q [auth G]SCOP2 SuperfamilyRibosomal protein S7 8065995 3000799 SCOP2 (2022-06-29)
R [auth H]SCOP2 FamilyRibosomal protein S8 8079070 4002027 SCOP2 (2022-06-29)
R [auth H]SCOP2 SuperfamilyRibosomal protein S8 8079071 3000709 SCOP2 (2022-06-29)
S [auth I]SCOP2 FamilyTranslational machinery components 8082688 4000951 SCOP2 (2022-06-29)
S [auth I]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8082689 3000100 SCOP2 (2022-06-29)
T [auth J]SCOP2 FamilyRibosomal protein S10 8096253 4001240 SCOP2 (2022-06-29)
T [auth J]SCOP2 SuperfamilyRibosomal protein S10 8096254 3001336 SCOP2 (2022-06-29)
U [auth K]SCOP2 FamilyRibosomal protein L18p and S11 8096255 4000555 SCOP2 (2022-06-29)
U [auth K]SCOP2 SuperfamilyTranslational machinery components 8096256 3000571 SCOP2 (2022-06-29)
W [auth M]SCOP2 FamilyRibosomal protein S13 8096257 4000260 SCOP2 (2022-06-29)
W [auth M]SCOP2 SuperfamilyS13-like H2TH domain 8096258 3000053 SCOP2 (2022-06-29)
X [auth N]SCOP2 FamilyRibosomal protein S14p/S29e 8047585 4003647 SCOP2 (2022-06-29)
X [auth N]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052591 3000068 SCOP2 (2022-06-29)
Y [auth O]SCOP2 Family40S Ribosomal protein S13, N-terminal domain-like 8050315 4006843 SCOP2 (2022-06-29)
Y [auth O]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S13 8052948 4000767 SCOP2 (2022-06-29)
Y [auth O]SCOP2 SuperfamilyHomeodomain-like 8052949 3000001 SCOP2 (2022-06-29)
Y [auth O]SCOP2 SuperfamilyS15/NS1 RNA-binding domain 8052950 3001284 SCOP2 (2022-06-29)
AA [auth Q]SCOP2 FamilyRibosomal S17 N-terminal domain-like 8045082 4004290 SCOP2 (2022-06-29)
AA [auth Q]SCOP2 FamilyCold shock DNA-binding domain-like 8052713 4001909 SCOP2 (2022-06-29)
AA [auth Q]SCOP2 SuperfamilyRibosomal S17 N-terminal domain-like 8052712 3002138 SCOP2 (2022-06-29)
AA [auth Q]SCOP2 SuperfamilyNucleic acid-binding proteins 8052714 3000135 SCOP2 (2022-06-29)
EA [auth U]SCOP2 FamilyL30e/L7ae ribosomal proteins 8077132 4001513 SCOP2 (2022-06-29)
EA [auth U]SCOP2 SuperfamilyL30e-like 8077133 3001739 SCOP2 (2022-06-29)
GA [auth W]SCOP2 FamilyRibosomal protein S4e, C-terminal KOW domain-like 8044903 4004197 SCOP2 (2022-06-29)
GA [auth W]SCOP2 FamilyCold shock DNA-binding domain-like 8048396 4001909 SCOP2 (2022-06-29)
GA [auth W]SCOP2 FamilyEukaryotic ribosomal protein S4e-like 8050333 4006847 SCOP2 (2022-06-29)
GA [auth W]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052741 3000334 SCOP2 (2022-06-29)
GA [auth W]SCOP2 SuperfamilyNucleic acid-binding proteins 8052740 3000135 SCOP2 (2022-06-29)
GA [auth W]SCOP2 SuperfamilyAlpha-L RNA-binding motif 8052739 3001473 SCOP2 (2022-06-29)
HA [auth X]SCOP2 FamilyRibosomal protein S30e-like 8046416 4005067 SCOP2 (2022-06-29)
HA [auth X]SCOP2 SuperfamilyRibosomal protein S30e-like 8053458 3002190 SCOP2 (2022-06-29)
IA [auth Y]SCOP2 FamilyRibosomal protein S6e 8048565 4006143 SCOP2 (2022-06-29)
IA [auth Y]SCOP2 SuperfamilyGS N-terminal domain-like 8053169 3000408 SCOP2 (2022-06-29)
JA [auth Z]SCOP2 FamilyRibosomal protein S21e 8048773 4006215 SCOP2 (2022-06-29)
JA [auth Z]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053132 3000068 SCOP2 (2022-06-29)
MA [auth c]SCOP2 FamilyEukaryotic translation initiation factor 3 subunit C (EIF3C), N-terminal domain-like 8047256 4005530 SCOP2 (2022-06-29)
MA [auth c]SCOP2 FamilyPCI domain (PINT motif) 8093049 4000147 SCOP2 (2022-06-29)
MA [auth c]SCOP2 SuperfamilyTPR-like 8093046 3001345 SCOP2 (2022-06-29)
MA [auth c]SCOP2 SuperfamilyWinged helix DNA-binding domain 8093053 3000034 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]eIF-1ae4uer01 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: eIF-1aECOD (1.6)
B [auth 1]Ribosomal_S28ee4uer11 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
C [auth 2]Ribosomal_S8ee4uer21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
D [auth 3]Ribosomal_S7e_Ne4uer31 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
D [auth 3]Ribosomal_S7e_C_2e4uer32 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
E [auth 4]Ribosomal_S3Ae_Ne4uer41 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
E [auth 4]Ribosomal_S3Ae_Ce4uer42 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
F [auth 5]Ribosomal_S26ee4uer51 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
G [auth 6]Ribosomal_S27ee4uer61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
H [auth 7]S10_plectine4uer71 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
I [auth 8]Ribosomal_S25e4uer81 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
J [auth 9]Ribosomal_S27e4uer91 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
L [auth B]Ribosomal_S2_2e4uerB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
M [auth C]Ribosomal_S3_Ce4uerC2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
M [auth C]KH_2_3e4uerC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
N [auth D]S4e4uerD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
O [auth E]Ribosomal_S5_C_1e4uerE3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
O [auth E]Ribosomal_S5_3e4uerE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
O [auth E]Ribosomal_S5_2e4uerE1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
P [auth F]SUI1e4uerF1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: SUI1ECOD (1.6)
Q [auth G]Ribosomal_S7_1e4uerG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
R [auth H]Ribosomal_S8_N_1e4uerH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
R [auth H]Ribosomal_S8_C_1e4uerH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
S [auth I]Ribosomal_S9e4uerI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
T [auth J]Ribosomal_S10_1e4uerJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
U [auth K]Ribosomal_S11e4uerK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
V [auth L]Ribosom_S12_S23e4uerL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
W [auth M]Ribosomal_S13e4uerM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
X [auth N]Ribosomal_S14_2e4uerN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
Y [auth O]Ribosomal_S13_Ne4uerO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
Y [auth O]Ribosomal_S15_2e4uerO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
Z [auth P]Ribosomal_S24ee4uerP1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
AA [auth Q]Ribosomal_S17_1e4uerQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
BA [auth R]ANAPC4_WD40_2e4uerR1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
CA [auth S]Ribosomal_S19e4uerS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
DA [auth T]Ribosomal_S19ee4uerT1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
EA [auth U]Ribosomal_L7Aee4uerU1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth V]Ribosomal_S17ee4uerV1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
GA [auth W]Ribosomal_S4ee4uerW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
GA [auth W]40S_S4_Ce4uerW2 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
GA [auth W]RS4NTe4uerW3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
HA [auth X]Ribosomal_S30e4uerX1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
IA [auth Y]Ribosomal_S6ee4uerY1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
JA [auth Z]Ribosomal_S21ee4uerZ1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
KA [auth a]PCI_3e4uera2 A: alpha arraysX: HTHH: HTHT: wingedF: PCI_3ECOD (1.6)
KA [auth a]KOG2072e4uera1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: KOG2072ECOD (1.6)
LA [auth b]DPPIV_Ne4uerb1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 9-bladedF: DPPIV_NECOD (1.6)
LA [auth b]RRM_1_2e4uerb2 A: a+b two layersX: Alpha-beta plaitsH: RNA-binding domain, RBD (From Topology)T: RNA-binding domain, RBDF: RRM_1_2ECOD (1.6)
MA [auth c]PCIe4uerc1 A: alpha arraysX: HTHH: HTHT: wingedF: PCIECOD (1.6)
MA [auth c]eIF-3c_Ne4uerc2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: eIF-3c_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01176Translation initiation factor 1A / IF-1 (eIF-1a)Translation initiation factor 1A / IF-1This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1. Domain
B [auth 1]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
C [auth 2]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
D [auth 3]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
E [auth 4]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
F [auth 5]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
G [auth 6]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
H [auth 7]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
I [auth 8]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
J [auth 9]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...Domain
K [auth A]PF22591eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like)eIF3a, PCI domain, TPR-like region- Repeat
L [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
L [auth B]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...Domain
M [auth C]PF07650KH domain (KH_2)KH domainDomain
M [auth C]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
N [auth D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
N [auth D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
O [auth E]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
O [auth E]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
P [auth F]PF01253Translation initiation factor SUI1 (SUI1)Translation initiation factor SUI1Domain
Q [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
R [auth H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
S [auth I]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
T [auth J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
U [auth K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
V [auth L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
W [auth M]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
X [auth N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
Y [auth O]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
Y [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
Z [auth P]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
AA [auth Q]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
AA [auth Q]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
BA [auth R]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
CA [auth S]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
DA [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
EA [auth U]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
FA [auth V]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
GA [auth W]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
GA [auth W]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
GA [auth W]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
GA [auth W]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
GA [auth W]PF00467KOW motif (KOW)KOW motif- Family
HA [auth X]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
IA [auth Y]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
JA [auth Z]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]EIF1A - -
B [auth 1]ES28
C [auth 2]ES8
D [auth 3]ES7
E [auth 4]ES1
F [auth 5]ES26
G [auth 6]ES27
H [auth 7]ES10 -
I [auth 8]ES25- -
J [auth 9]ES31
K [auth A]18S RRNA---
L [auth B]US2
M [auth C]US3
N [auth D]US4
O [auth E]US5
P [auth F]EIF1 - -
Q [auth G]US7
R [auth H]US8
S [auth I]US9
T [auth J]US10
U [auth K]US11
V [auth L]US12
W [auth M]US13
X [auth N]US14
Y [auth O]US15
Z [auth P]ES24
AA [auth Q]US17
BA [auth R]RACK1 - -
CA [auth S]US19
DA [auth T]ES19
EA [auth U]ES12
FA [auth V]ES17
GA [auth W]ES4
HA [auth X]ES30
IA [auth Y]ES6
JA [auth Z]ES21
KA [auth a]EIF3A
LA [auth b]EIF3B
MA [auth c]EIF3C

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR018104Translation initiation factor 1A (eIF-1A), conserved siteConserved Site
A [auth 0]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A [auth 0]IPR006196RNA-binding domain, S1, IF1 typeDomain
A [auth 0]IPR001253Translation initiation factor 1A (eIF-1A)Family
B [auth 1]IPR028626Ribosomal protein eS28 conserved siteConserved Site
B [auth 1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth 1]IPR000289Small ribosomal subunit protein eS28Family
C [auth 2]IPR001047Small ribosomal subunit protein eS8Family
C [auth 2]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
C [auth 2]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
C [auth 2]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
D [auth 3]IPR000554Small ribosomal subunit protein eS7Family
D [auth 3]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
E [auth 4]IPR001593Small ribosomal subunit protein eS1Family
E [auth 4]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
E [auth 4]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
F [auth 5]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
F [auth 5]IPR000892Small ribosomal subunit protein eS26Family
F [auth 5]IPR047864Ribosomal protein eS26, conserved siteConserved Site
G [auth 6]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
G [auth 6]IPR000592Small ribosomal subunit protein eS27Family
G [auth 6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
H [auth 7]IPR037447Small ribosomal subunit protein eS10Family
H [auth 7]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
H [auth 7]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
H [auth 7]IPR005326Plectin/eS10, N-terminalDomain
I [auth 8]IPR004977Small ribosomal subunit protein eS25Family
I [auth 8]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
I [auth 8]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
J [auth 9]IPR002906Small ribosomal subunit protein eS31Domain
J [auth 9]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
J [auth 9]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
L [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
L [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
L [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
L [auth B]IPR001865Small ribosomal subunit protein uS2Family
L [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
M [auth C]IPR004044K Homology domain, type 2Domain
M [auth C]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
M [auth C]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
M [auth C]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
M [auth C]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
M [auth C]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
M [auth C]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
N [auth D]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
N [auth D]IPR002942RNA-binding S4 domainDomain
N [auth D]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
N [auth D]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
N [auth D]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
N [auth D]IPR022801Small ribosomal subunit protein uS4Family
O [auth E]IPR000851Small ribosomal subunit protein uS5Family
O [auth E]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
O [auth E]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
O [auth E]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
O [auth E]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
O [auth E]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
O [auth E]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
P [auth F]IPR005874Eukaryotic translation initiation factor SUI1Family
P [auth F]IPR001950SUI1 domainDomain
P [auth F]IPR036877SUI1 domain superfamilyHomologous Superfamily
Q [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Q [auth G]IPR000235Small ribosomal subunit protein uS7Family
Q [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Q [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
R [auth H]IPR000630Small ribosomal subunit protein uS8Family
R [auth H]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
R [auth H]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
S [auth I]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
S [auth I]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
S [auth I]IPR000754Small ribosomal subunit protein uS9Family
S [auth I]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
T [auth J]IPR001848Small ribosomal subunit protein uS10Family
T [auth J]IPR027486Small ribosomal subunit protein uS10 domainDomain
T [auth J]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
T [auth J]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
T [auth J]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
U [auth K]IPR001971Small ribosomal subunit protein uS11Family
U [auth K]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
U [auth K]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
V [auth L]IPR006032Small ribosomal subunit protein uS12Family
V [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
V [auth L]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
W [auth M]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
W [auth M]IPR001892Small ribosomal subunit protein uS13Family
W [auth M]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
W [auth M]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
X [auth N]IPR001209Small ribosomal subunit protein uS14Family
X [auth N]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
X [auth N]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
X [auth N]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Y [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Y [auth O]IPR000589Small ribosomal subunit protein uS15Family
Z [auth P]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
Z [auth P]IPR001976Small ribosomal subunit protein eS24Family
Z [auth P]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth P]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
AA [auth Q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
AA [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth Q]IPR000266Small ribosomal subunit protein uS17Family
AA [auth Q]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
AA [auth Q]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
BA [auth R]IPR045223Small ribosomal subunit protein RACK1-likeFamily
BA [auth R]IPR001680WD40 repeatRepeat
BA [auth R]IPR019775WD40 repeat, conserved siteConserved Site
BA [auth R]IPR020472G-protein beta WD-40 repeatRepeat
BA [auth R]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
BA [auth R]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
CA [auth S]IPR002222Small ribosomal subunit protein uS19Family
CA [auth S]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
CA [auth S]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
CA [auth S]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
DA [auth T]IPR001266Small ribosomal subunit protein eS19Family
DA [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
DA [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
EA [auth U]IPR000530Small ribosomal subunit protein eS12Family
EA [auth U]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth U]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EA [auth U]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
FA [auth V]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
FA [auth V]IPR001210Small ribosomal subunit protein eS17Family
FA [auth V]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
GA [auth W]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
GA [auth W]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
GA [auth W]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
GA [auth W]IPR002942RNA-binding S4 domainDomain
GA [auth W]IPR013845Small ribosomal subunit protein eS4, central regionDomain
GA [auth W]IPR000876Small ribosomal subunit protein eS4Family
GA [auth W]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
GA [auth W]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
GA [auth W]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
GA [auth W]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GA [auth W]IPR005824KOWDomain
HA [auth X]IPR006846Small ribosomal subunit protein eS30Family
IA [auth Y]IPR014401Small ribosomal subunit protein eS6-likeFamily
IA [auth Y]IPR001377Small ribosomal subunit protein eS6Family
IA [auth Y]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
JA [auth Z]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
JA [auth Z]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
JA [auth Z]IPR001931Small ribosomal subunit protein eS21Family
KA [auth a]IPR027512Eukaryotic translation initiation factor 3 subunit AFamily
KA [auth a]IPR000717Proteasome component (PCI) domainDomain
KA [auth a]IPR054711eIF3a, PCI domain, TPR-like regionDomain
LA [auth b]IPR013979Translation initiation factor, beta propellor-like domainDomain
LA [auth b]IPR034363eIF3B, RNA recognition motifDomain
LA [auth b]IPR000504RNA recognition motif domainDomain
LA [auth b]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LA [auth b]IPR011400Eukaryotic translation initiation factor 3 subunit BFamily
LA [auth b]IPR035979RNA-binding domain superfamilyHomologous Superfamily
LA [auth b]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
MA [auth c]IPR027516Eukaryotic translation initiation factor 3 subunit CFamily
MA [auth c]IPR000717Proteasome component (PCI) domainDomain
MA [auth c]IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainDomain