4V5T | pdb_00004v5t

X-ray structure of the Grapevine Fanleaf virus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth CL]Ribosomal_S4ee4v5tCL1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
Z [auth BF]Ribosomal_S4ee4v5tBF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
YA [auth CK]Ribosomal_S4ee4v5tCK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
Y [auth BE]Ribosomal_S4ee4v5tBE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
XA [auth CJ]Ribosomal_S4ee4v5tCJ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
X [auth BD]Ribosomal_S4ee4v5tBD1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
WA [auth CI]Ribosomal_S4ee4v5tCI1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
W [auth BC]Ribosomal_S4ee4v5tBC1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
VA [auth CH]Ribosomal_S4ee4v5tCH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
V [auth BB]Ribosomal_S4ee4v5tBB1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
UA [auth CG]Ribosomal_S4ee4v5tCG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
U [auth BA]Ribosomal_S4ee4v5tBA1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
TA [auth CF]Ribosomal_S4ee4v5tCF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
T [auth AT]Ribosomal_S4ee4v5tAT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
SA [auth CE]Ribosomal_S4ee4v5tCE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
S [auth AS]Ribosomal_S4ee4v5tAS1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
RA [auth CD]Ribosomal_S4ee4v5tCD1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
R [auth AR]Ribosomal_S4ee4v5tAR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
QA [auth CC]Ribosomal_S4ee4v5tCC1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
Q [auth AQ]Ribosomal_S4ee4v5tAQ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
PA [auth CB]Ribosomal_S4ee4v5tCB1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
P [auth AP]Ribosomal_S4ee4v5tAP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
OA [auth CA]Ribosomal_S4ee4v5tCA1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
O [auth AO]Ribosomal_S4ee4v5tAO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
NA [auth BT]Ribosomal_S4ee4v5tBT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
N [auth AN]Ribosomal_S4ee4v5tAN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
MA [auth BS]Ribosomal_S4ee4v5tBS1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
M [auth AM]Ribosomal_S4ee4v5tAM1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
LA [auth BR]Ribosomal_S4ee4v5tBR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
L [auth AL]Ribosomal_S4ee4v5tAL1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
KA [auth BQ]Ribosomal_S4ee4v5tBQ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
K [auth AK]Ribosomal_S4ee4v5tAK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
JA [auth BP]Ribosomal_S4ee4v5tBP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
J [auth AJ]Ribosomal_S4ee4v5tAJ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
IA [auth BO]Ribosomal_S4ee4v5tBO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
I [auth AI]Ribosomal_S4ee4v5tAI1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
HB [auth CT]Ribosomal_S4ee4v5tCT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
HA [auth BN]Ribosomal_S4ee4v5tBN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
H [auth AH]Ribosomal_S4ee4v5tAH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
GB [auth CS]Ribosomal_S4ee4v5tCS1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
GA [auth BM]Ribosomal_S4ee4v5tBM1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
G [auth AG]Ribosomal_S4ee4v5tAG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
FB [auth CR]Ribosomal_S4ee4v5tCR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
FA [auth BL]Ribosomal_S4ee4v5tBL1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
F [auth AF]Ribosomal_S4ee4v5tAF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
EB [auth CQ]Ribosomal_S4ee4v5tCQ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
EA [auth BK]Ribosomal_S4ee4v5tBK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
E [auth AE]Ribosomal_S4ee4v5tAE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
DB [auth CP]Ribosomal_S4ee4v5tCP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
DA [auth BJ]Ribosomal_S4ee4v5tBJ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
D [auth AD]Ribosomal_S4ee4v5tAD1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
CB [auth CO]Ribosomal_S4ee4v5tCO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
CA [auth BI]Ribosomal_S4ee4v5tBI1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
C [auth AC]Ribosomal_S4ee4v5tAC1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
BB [auth CN]Ribosomal_S4ee4v5tCN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
BA [auth BH]Ribosomal_S4ee4v5tBH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
B [auth AB]Ribosomal_S4ee4v5tAB1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
AB [auth CM]Ribosomal_S4ee4v5tCM1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
AA [auth BG]Ribosomal_S4ee4v5tBG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)
A [auth AA]Ribosomal_S4ee4v5tAA1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
COAT PROTEIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR021081Nepovirus subgroup A, RNA2 polyprotein, Protein 2ADomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR005306Nepovirus coat protein, N-terminalDomain
IPR005305Nepovirus coat protein, C-terminalDomain
IPR005054Nepovirus coat proteinDomain