4V86 | pdb_00004v86

Structure-function Analysis of Receptor-binding in Adeno-Associated Virus Serotype 6 (AAV-6)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
AA [auth a]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
AB [auth 0]SCOP2 FamilyParvovirinae-like VP 8071435 4003479 SCOP2 (2022-06-29)
AB [auth 0]SCOP2 SuperfamilyssDNA viruses 8071436 3000931 SCOP2 (2022-06-29)
CB [auth 2]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
DB [auth 3]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
EB [auth 4]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
FB [auth 5]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
GB [auth 6]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
HB [auth 7]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
BB [auth 1]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses 8071436 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AA [auth a]LHCe4v86a1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
AB [auth 0]LHCe4v8601 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
CB [auth 2]LHCe4v8621 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
DA [auth d]LHCe4v86d1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
DB [auth 3]LHCe4v8631 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ELHCe4v86E1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
EA [auth e]LHCe4v86e1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
EB [auth 4]LHCe4v8641 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
FA [auth f]LHCe4v86f1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
FB [auth 5]LHCe4v8651 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
GA [auth g]LHCe4v86g1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
GB [auth 6]LHCe4v8661 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
HA [auth h]LHCe4v86h1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
HB [auth 7]LHCe4v8671 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
JLHCe4v86J1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
JA [auth j]LHCe4v86j1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
KLHCe4v86K1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
LLHCe4v86L1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
LA [auth l]LHCe4v86l1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
MLHCe4v86M1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
MA [auth m]LHCe4v86m1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
NLHCe4v86N1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
NA [auth n]LHCe4v86n1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
OLHCe4v86O1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
OA [auth o]LHCe4v86o1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
PA [auth p]LHCe4v86p1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
QLHCe4v86Q1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
RLHCe4v86R1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
RA [auth r]LHCe4v86r1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
SA [auth s]LHCe4v86s1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
TLHCe4v86T1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
TA [auth t]LHCe4v86t1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
UA [auth u]LHCe4v86u1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
VLHCe4v86V1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
WLHCe4v86W1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
WA [auth w]LHCe4v86w1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
XA [auth x]LHCe4v86x1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
YLHCe4v86Y1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ZLHCe4v86Z1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ZA [auth z]LHCe4v86z1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
YA [auth y]LHCe4v86y1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
XLHCe4v86X1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
VA [auth v]LHCe4v86v1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ULHCe4v86U1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
SLHCe4v86S1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
QA [auth q]LHCe4v86q1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
PLHCe4v86P1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
KA [auth k]LHCe4v86k1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
IA [auth i]LHCe4v86i1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ILHCe4v86I1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
HLHCe4v86H1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
GLHCe4v86G1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
FLHCe4v86F1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
DLHCe4v86D1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
CA [auth c]LHCe4v86c1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
CLHCe4v86C1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
BB [auth 1]LHCe4v8611 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
BA [auth b]LHCe4v86b1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
BLHCe4v86B1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)
ALHCe4v86A1 A: alpha arraysX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: LHCECOD (v295)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR001403Coat protein VP1/VP2, ParvovirusDomain
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily