4XYN
X-ray structure of Ca(2+)-S100B with human RAGE-derived W61 peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | EF-hand | 8042162 | 3001983 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | EF-hand | 8042162 | 3001983 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | EF-hand | 8042162 | 3001983 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | EF-hand | 8042162 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | PF00036,PF01023 | e4xynA1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036,PF01023 | ECOD (1.6) |
C [auth B] | PF00036,PF01023 | e4xynB1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036,PF01023 | ECOD (1.6) |
D [auth C] | PF00036,PF01023 | e4xynC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036,PF01023 | ECOD (1.6) |
E [auth D] | PF00036,PF01023 | e4xynD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036,PF01023 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
C [auth B] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
D [auth C] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
E [auth D] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth P] | PF00047 | Immunoglobulin domain (ig) | Immunoglobulin domain | Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ... | Domain |
B [auth A], C [auth B], D [auth C], E [auth D] | PF01023 | S-100/ICaBP type calcium binding domain (S_100) | S-100/ICaBP type calcium binding domain | The S-100 domain is a subfamily of the EF-hand calcium binding proteins. | Domain |
B [auth A], C [auth B], D [auth C], E [auth D] | PF00036 | EF hand (EF-hand_1) | EF hand | The EF-hands can be divided into two classes: signalling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typica ... | Domain |