4Z3J | pdb_00004z3j

Crystal structure of the lectin domain of PapG from E. coli BI47 in space group P1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4z3jd_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	PapG adhesin receptor-binding domain	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
C	d4z3jc_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	PapG adhesin receptor-binding domain	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d4z3jb_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	PapG adhesin receptor-binding domain	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d4z3ja_	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	PapG adhesin receptor-binding domain	automated matches	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Bacterial adhesin-like	8085480	3000723	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bacterial adhesin-like	8085480	3000723	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial adhesin-like	8085480	3000723	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Bacterial adhesin-like	8085480	3000723	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PapG_N	e4z3jD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: PapG_N	ECOD (1.6)
C	PapG_N	e4z3jC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: PapG_N	ECOD (1.6)
B	PapG_N	e4z3jB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: PapG_N	ECOD (1.6)
A	PapG_N	e4z3jA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: PapG_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.40.1370	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesin receptor binding domain	CATH (4.2.0)
C	2.60.40.1370	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesin receptor binding domain	CATH (4.2.0)
B	2.60.40.1370	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesin receptor binding domain	CATH (4.2.0)
A	2.60.40.1370	Mainly Beta	Sandwich	Immunoglobulin-like	Bacterial adhesin receptor binding domain	CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	PapG, lectin domain	binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	cell adhesion cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR038420	PapG, carbohydrate-binding domain superfamily	Homologous Superfamily
A, B, C, D	IPR005310	PapG, carbohydrate-binding domain	Domain
A, B, C, D	IPR008966	Adhesion domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.