4L3T
Crystal Structure of Substrate-free Human Presequence Protease
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | M16C_assoc | e4l3tA4 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: M16C_assoc | ECOD (1.6) |
A | Peptidase_M16_C_4 | e4l3tA3 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C_4 | ECOD (1.6) |
A | Peptidase_M16_C_3 | e4l3tA1 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C_3 | ECOD (1.6) |
A | Peptidase_M16 | e4l3tA2 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
B | M16C_assoc | e4l3tB5 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: M16C_assoc | ECOD (1.6) |
B | Peptidase_M16_C_4 | e4l3tB6 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C_4 | ECOD (1.6) |
B | Peptidase_M16_C_3 | e4l3tB7 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C_3 | ECOD (1.6) |
B | Peptidase_M16 | e4l3tB1 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.830.10 | Alpha Beta | 2-Layer Sandwich | Cytochrome Bc1 Complex | Chain A, domain 1 | CATH (4.3.0) |
B | 3.30.830.10 | Alpha Beta | 2-Layer Sandwich | Cytochrome Bc1 Complex | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain | |
PF08367 | Peptidase M16C associated (M16C_assoc) | Peptidase M16C associated | - | Family | |
PF22516 | PreP C-terminal domain (PreP_C) | PreP C-terminal domain | PreP is a protease that degrades targeting peptides as well as other unstructured peptides in both mitochondria and chloroplasts. This entry represents the C-terminal domain of PreP and related proteins. | Domain | |
PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family | |
PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain | |
PF08367 | Peptidase M16C associated (M16C_assoc) | Peptidase M16C associated | - | Family | |
PF22516 | PreP C-terminal domain (PreP_C) | PreP C-terminal domain | PreP is a protease that degrades targeting peptides as well as other unstructured peptides in both mitochondria and chloroplasts. This entry represents the C-terminal domain of PreP and related proteins. | Domain | |
PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007863 | Peptidase M16, C-terminal | Domain | |
IPR013578 | Peptidase M16C associated | Domain | |
IPR011249 | Metalloenzyme, LuxS/M16 peptidase-like | Homologous Superfamily | |
IPR011765 | Peptidase M16, N-terminal | Domain | |
IPR007863 | Peptidase M16, C-terminal | Domain | |
IPR013578 | Peptidase M16C associated | Domain | |
IPR011249 | Metalloenzyme, LuxS/M16 peptidase-like | Homologous Superfamily | |
IPR011765 | Peptidase M16, N-terminal | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
CAS | Parent Component: CYS | |
MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0075 , AA0076 :  N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 | |
CAS | Parent Component: CYS :  AA0075 , AA0076 | |
MLY | Parent Component: LYS :  AA0075 , AA0076 , AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 | |
MLZ | Parent Component: LYS :  AA0075 , AA0076 , AA0075 , AA0076 :  N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 , N6,N6-dimethyl-L-lysine MOD:00084 , N6-methyl-L-lysine MOD:00085 |