5E16
Co-crystal structure of the N-termial cGMP binding domain of Plasmodium falciparum PKG with cGMP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5e16a_ | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | automated matches | automated matches | (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily | |
IPR018488 | Cyclic nucleotide-binding, conserved site | Conserved Site | |
IPR000719 | Protein kinase domain | Domain | |
IPR000961 | AGC-kinase, C-terminal | Domain | |
IPR000595 | Cyclic nucleotide-binding domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR002374 | cGMP-dependent kinase | Family | |
IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily | |
IPR035014 | cGMP-dependent protein kinase, catalytic domain | Domain | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |