5EBU | pdb_00005ebu

Aerococcus viridans L-lactate oxidase Y215F mutant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5ebua_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
B	d5ebub_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
C	d5ebuc_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
D	d5ebud_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
E	d5ebue_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
F	d5ebuf_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
G	d5ebug_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)
H	d5ebuh_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	FMN-linked oxidoreductases	automated matches	automated matches	(Aerococcus viridans ) [TaxId: 1377 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e5ebuA1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
B		e5ebuB1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
C		e5ebuC1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
D		e5ebuD1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
E		e5ebuE1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
F		e5ebuF1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
G		e5ebuG1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)
H		e5ebuH1	A: Spectrin repeat-like	X: EF-hand-related	H: EF-hand	T: Methyltransf_31	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
B	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
C	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
D	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
E	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
F	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
G	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
H	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	L-lactate oxidase	oxidoreductase activity catalytic activity FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR012133	Alpha-hydroxy acid dehydrogenase, FMN-dependent	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008259	FMN-dependent alpha-hydroxy acid dehydrogenase, active site	Active Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR037396	FMN hydroxy acid dehydrogenase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR014080	L-lactate oxidase	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000262	FMN-dependent dehydrogenase	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.