5EZJ | pdb_00005ezj

Crystal Structure of Fab of parasite invasion inhibitory antibody c1 - orthorhombic form

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5ezjb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad5ezja_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BFlav_NS3-hel_Ce5ezjB1 A: alpha bundlesX: SH3H: SH3T: SH3F: Flav_NS3-hel_CECOD (develop294)
AFlav_NS3-hel_Ce5ezjA1 A: alpha bundlesX: SH3H: SH3T: SH3F: Flav_NS3-hel_CECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
Fab c12 L-KAPPA Homo sapiens (human) IGKV4-1*01, IGKJ2*01, IGKJ4*01, IGKJ2*02, IGKJ4*02, IGKC*01, IGKC*04 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2_KAPPA IMGT (202610-0)
Fab c12 VH-CH1 Homo sapiens (human) IGHV3-48*01, IGHV3-48*02, IGHV3-48*04, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG2*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2_KAPPA IMGT (202610-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Light ChainIGKV6 Kappa-SAbDab (2026-03-20)
Heavy ChainIGHV4 --SAbDab (2026-03-20)