5FHZ | pdb_00005fhz

Human aldehyde dehydrogenase 1A3 complexed with NAD(+) and retinoic acid

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d5fhzh_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
G	d5fhzg_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
F	d5fhzf_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
E	d5fhze_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
D	d5fhzd_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d5fhzc_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d5fhzb_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d5fhza_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
G	SCOP2 Family	ALDH-like	8065573	4000806	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	ALDH-like	8065574	3001479	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ALDH-like	8065574	3001479	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	NucS_N	e5fhzH1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
G	NucS_N	e5fhzG1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
F	NucS_N	e5fhzF1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
E	NucS_N	e5fhzE1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
D	NucS_N	e5fhzD1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
C	NucS_N	e5fhzC1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
B	NucS_N	e5fhzB1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)
A	NucS_N	e5fhzA1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: NucS_N	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
H	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
G	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
G	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
F	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
F	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
E	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
E	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
D	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
D	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
C	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
C	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
B	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
B	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
A	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
A	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF00171	Aldehyde dehydrogenase family (Aldedh)	Aldehyde dehydrogenase family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Aldehyde dehydrogenase family 1 member A3	thyroid hormone binding binding hormone binding oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity aldehyde dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor NAD+ binding NAD binding nucleotide binding nucleoside phosphate binding ion binding purine nucleotide binding thyroid hormone binding binding hormone binding oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity aldehyde dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor NAD+ binding NAD binding nucleotide binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding heterocyclic compound binding small molecule binding identical protein binding protein binding protein homodimerization activity protein dimerization activity aldehyde dehydrogenase (NAD+) activity retinal dehydrogenase (NAD+) activity	behavior multicellular organismal process locomotory behavior developmental process multicellular organism development sensory organ development anatomical structure development animal organ development respiratory system development nose development olfactory pit development system development diterpenoid metabolic process oxoacid metabolic process behavior multicellular organismal process locomotory behavior developmental process multicellular organism development sensory organ development anatomical structure development animal organ development respiratory system development nose development olfactory pit development system development diterpenoid metabolic process oxoacid metabolic process regulation of hormone levels biological regulation carboxylic acid metabolic process primary metabolic process organic acid metabolic process hormone metabolic process retinoic acid metabolic process retinoid metabolic process metabolic process cellular process small molecule metabolic process regulation of biological quality monocarboxylic acid metabolic process terpenoid metabolic process isoprenoid metabolic process lipid metabolic process gland development Harderian gland development retinal metabolic process aldehyde metabolic process olefinic compound metabolic process ear morphogenesis embryonic organ morphogenesis ear development embryonic morphogenesis embryo development anatomical structure morphogenesis sensory organ morphogenesis inner ear development inner ear morphogenesis animal organ morphogenesis embryonic organ development head development nucleus accumbens development forebrain development brain development nervous system development central nervous system development telencephalon development neural nucleus development striatum development subpallium development limbic system development reflex response to stimulus response to external stimulus righting reflex protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis apoptotic process cell death programmed cell death regulation of biological process positive regulation of programmed cell death regulation of cellular process regulation of apoptotic process positive regulation of biological process regulation of programmed cell death positive regulation of apoptotic process positive regulation of cellular process lipid biosynthetic process organic acid biosynthetic process terpenoid biosynthetic process carboxylic acid biosynthetic process monocarboxylic acid biosynthetic process small molecule biosynthetic process isoprenoid biosynthetic process diterpenoid biosynthetic process retinoic acid biosynthetic process biosynthetic process system process nervous system process neuromuscular process neuromuscular process controlling balance embryonic eye morphogenesis visual system development embryonic camera-type eye development eye morphogenesis sensory system development camera-type eye morphogenesis morphogenesis of embryonic epithelium epithelium development eye development morphogenesis of an epithelium tissue development embryonic camera-type eye morphogenesis tissue morphogenesis optic cup morphogenesis involved in camera-type eye development embryonic camera-type eye formation camera-type eye development anatomical structure formation involved in morphogenesis face development alcohol metabolic process retinol metabolic process primary alcohol metabolic process	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015590	Aldehyde dehydrogenase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016161	Aldehyde/histidinol dehydrogenase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR029510	Aldehyde dehydrogenase, glutamic acid active site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016160	Aldehyde dehydrogenase, cysteine active site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016162	Aldehyde dehydrogenase, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016163	Aldehyde dehydrogenase, C-terminal	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F, G, H	Pharos: P47895	isolated microphthalmia 8 microphthalmia medulloblastoma oligodendroglioma pancreatic ductal adenocarcinoma pilocytic astrocytoma acute myeloid leukemia Sjogren syndrome autism susceptibility 1 coloboma gastric cancer hereditary diffuse gastric adenocarcinoma isolated microphthalmia 1 malignant mesothelioma osteosarcoma isolated microphthalmia 8 microphthalmia medulloblastoma oligodendroglioma pancreatic ductal adenocarcinoma pilocytic astrocytoma acute myeloid leukemia Sjogren syndrome autism susceptibility 1 coloboma gastric cancer hereditary diffuse gastric adenocarcinoma isolated microphthalmia 1 malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pituitary cancer adenoma subependymal giant cell astrocytoma breast cancer Congenital ocular coloboma (disorder) gastric carcinoma intellectual disability nasopharyngeal carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis adrenal cortex carcinoma breast carcinoma cystic fibrosis gastric neoplasm invasive ductal breast carcinoma malignant ependymoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.