5FLC

Architecture of human mTOR Complex 1 - 5.9 Angstrom reconstruction

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth B]SCOP2B SuperfamilyFKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)8036936 3001600 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyFKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)8036936 3001600 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth B]PF08771e5flcB2 A: alpha bundlesX: Four-helical up-and-down bundleH: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (From Topology)T: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)F: PF08771ECOD (1.6)
F [auth B]PF02259e5flcB1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF02259ECOD (1.6)
F [auth B]PF00454,PF02260e5flcB3 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00454,PF02260ECOD (1.6)
J [auth F]PF08771e5flcF3 A: alpha bundlesX: Four-helical up-and-down bundleH: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (From Topology)T: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)F: PF08771ECOD (1.6)
J [auth F]PF02259e5flcF2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF02259ECOD (1.6)
J [auth F]PF00454,PF02260e5flcF1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00454,PF02260ECOD (1.6)
H [auth D]PF00400e5flcD1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
L [auth H]PF00400e5flcH1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth B],
J [auth F]		PF02260FATC domain (FATC)FATC domain- Family
F [auth B],
J [auth F]		PF08771FKBP12-rapamycin binding domain (FRB_dom)FKBP12-rapamycin binding domainThe macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ...The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapamycin binding domain (FRB) of the TOR proteins. This entry represents the FRB domain [1, 2].
Domain
F [auth B],
J [auth F]		PF00454Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)Phosphatidylinositol 3- and 4-kinase- Family
F [auth B],
J [auth F]		PF02259FAT domain (FAT)FAT domain- Repeat
H [auth D],
L [auth H]		PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1],
C [auth 3]		SERINE/THREONINE-PROTEIN KINASE MTOR---
B [auth 2],
D [auth 4]		SERINE/THREONINE-PROTEIN KINASE MTOR---
F [auth B],
J [auth F]		SERINE/THREONINE-PROTEIN KINASE MTOR
E [auth A],
I [auth E]		REGULATORY-ASSOCIATED PROTEIN OF MTOR---
G [auth C],
K [auth G]		FKBP---
H [auth D],
L [auth H]		TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth B],
J [auth F]		IPR016024Armadillo-type foldHomologous Superfamily
F [auth B],
J [auth F]		IPR009076FKBP12-rapamycin binding domainDomain
F [auth B],
J [auth F]		IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
F [auth B],
J [auth F]		IPR018936Phosphatidylinositol 3/4-kinase, conserved siteConserved Site
F [auth B],
J [auth F]		IPR036940Phosphatidylinositol 3-/4-kinase, catalytic domain superfamilyHomologous Superfamily
F [auth B],
J [auth F]		IPR014009PIK-related kinaseDomain
F [auth B],
J [auth F]		IPR026683Serine/threonine-protein kinase TOR, catalytic domainDomain
F [auth B],
J [auth F]		IPR003151PIK-related kinase, FATDomain
F [auth B],
J [auth F]		IPR036738FKBP12-rapamycin binding domain superfamilyHomologous Superfamily
F [auth B],
J [auth F]		IPR003152FATC domainDomain
F [auth B],
J [auth F]		IPR024585Serine/threonine-protein kinase mTOR domainDomain
F [auth B],
J [auth F]		IPR011989Armadillo-like helicalHomologous Superfamily
F [auth B],
J [auth F]		IPR000403Phosphatidylinositol 3-/4-kinase, catalytic domainDomain
F [auth B],
J [auth F]		IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
H [auth D],
L [auth H]		IPR019775WD40 repeat, conserved siteConserved Site
H [auth D],
L [auth H]		IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyHomologous Superfamily
H [auth D],
L [auth H]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H [auth D],
L [auth H]		IPR001680WD40 repeatRepeat
H [auth D],
L [auth H]		IPR037588Target of rapamycin complex subunit LST8Family
H [auth D],
L [auth H]		IPR020472G-protein beta WD-40 repeatRepeat

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
F [auth B],
J [auth F]		Pharos:  P42345
H [auth D],
L [auth H]		Pharos:  Q9BVC4