5IB7

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth 1I]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
NB [auth 1A]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
K [auth 2I]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
OB [auth 2A]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
L [auth 3I]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
PB [auth 3A]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
M [auth 4I]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
QB [auth 4A]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
P [auth 7I]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
TB [auth 7A]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
R [auth 9I]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
VB [auth 9A]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
WB [auth AA]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
B [auth 1E]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
FB [auth 12]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
T [auth BI]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
XB [auth BA]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
FC [auth 19]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
FC [auth 19]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
GB [auth 22]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
GB [auth 22]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
DA [auth 21]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
GC [auth 29]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
EA [auth 31]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
HC [auth 39]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
KC [auth 69]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
KC [auth 69]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
IA [auth 58]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
LC [auth 15]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
JA [auth 68]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
MC [auth 25]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
KA [auth 78]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
NC [auth 35]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
LA [auth 88]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
OC [auth 45]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
MA [auth 98]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
PC [auth 55]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
D [auth 3E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
HB [auth 32]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
NA [auth A8]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
QC [auth 65]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
OA [auth B8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
RC [auth 75]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
PA [auth C8]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
SC [auth 85]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
QA [auth D8]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
TC [auth 95]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
RA [auth E8]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
UC [auth A5]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
SA [auth F8]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
VC [auth B5]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
TA [auth G8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
WC [auth C5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
VA [auth I8]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
YC [auth E5]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
WA [auth J8]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
ZC [auth F5]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
IB [auth 42]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
IB [auth 42]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
AD [auth G5]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
XA [auth K8]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
ZA [auth M8]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
AB [auth N8]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
CD [auth J5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
BB [auth O8]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
DB [auth Q8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
ED [auth M5]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
G [auth 6E]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
KB [auth 62]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
I [auth 8E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
MB [auth 82]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth 1I]Ribosomal_S10e5ib71I1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
NB [auth 1A]Ribosomal_S10e5ib71A1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth 2I]Ribosomal_S11e5ib72I1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
OB [auth 2A]Ribosomal_S11e5ib72A1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
L [auth 3I]Ribosom_S12_S23e5ib73I1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
PB [auth 3A]Ribosom_S12_S23e5ib73A1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth 4I]Ribosomal_S13_1e5ib74I1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
QB [auth 4A]Ribosomal_S13_1e5ib74A1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
N [auth 5I]Ribosomal_S14e5ib75I1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
RB [auth 5A]Ribosomal_S14e5ib75A1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
O [auth 6I]Ribosomal_S15_1e5ib76I1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
SB [auth 6A]Ribosomal_S15_1e5ib76A1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth 7I]Ribosomal_S16_1e5ib77I1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
TB [auth 7A]Ribosomal_S16_1e5ib77A1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
Q [auth 8I]Ribosomal_S17_1e5ib78I1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
UB [auth 8A]Ribosomal_S17_1e5ib78A1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth 9I]Ribosomal_S18e5ib79I1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
VB [auth 9A]Ribosomal_S18e5ib79A1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
S [auth AI]Ribosomal_S19e5ib7AI1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
WB [auth AA]Ribosomal_S19e5ib7AA1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
B [auth 1E]Ribosomal_S2e5ib71E1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
FB [auth 12]Ribosomal_S2e5ib7121 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
T [auth BI]Ribosomal_S20pe5ib7BI1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
XB [auth BA]Ribosomal_S20pe5ib7BA1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
BA [auth 71]Ribosomal_L1_2nd_1e5ib7711 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
CA [auth 11]Ribosomal_L2_1e5ib7112 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
CA [auth 11]Ribosomal_L2_Ce5ib7111 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
FC [auth 19]Ribosomal_L2_1e5ib7192 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
FC [auth 19]Ribosomal_L2_Ce5ib7191 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
C [auth 2E]Ribosomal_S3_Ce5ib72E1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth 2E]KH_2_1e5ib72E2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
GB [auth 22]Ribosomal_S3_Ce5ib7221 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
GB [auth 22]KH_2_1e5ib7222 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
DA [auth 21]Ribosomal_L3e5ib7211 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
GC [auth 29]Ribosomal_L3e5ib7291 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
EA [auth 31]Ribosomal_L4e5ib7311 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
HC [auth 39]Ribosomal_L4e5ib7391 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
FA [auth 41]Ribosomal_L5_Ce5ib7411 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
IC [auth 49]Ribosomal_L5_Ce5ib7491 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
GA [auth 51]Ribosomal_L6e5ib7511 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
GA [auth 51]Ribosomal_L6_1e5ib7512 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
JC [auth 59]Ribosomal_L6e5ib7592 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
JC [auth 59]Ribosomal_L6_1e5ib7591 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
HA [auth 61]Ribosomal_L9_Ne5ib7612 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
HA [auth 61]Ribosomal_L9_Ce5ib7611 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
KC [auth 69]Ribosomal_L9_Ne5ib7692 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
KC [auth 69]Ribosomal_L9_Ce5ib7691 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
IA [auth 58]Ribosomal_L13e5ib7581 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
LC [auth 15]Ribosomal_L13e5ib7151 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
JA [auth 68]Ribosomal_L14e5ib7681 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
MC [auth 25]Ribosomal_L14e5ib7251 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
KA [auth 78]Ribosomal_L27Ae5ib7781 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
NC [auth 35]Ribosomal_L27Ae5ib7351 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
LA [auth 88]Ribosomal_L16e5ib7881 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
OC [auth 45]Ribosomal_L16e5ib7451 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
MA [auth 98]Ribosomal_L17_1e5ib7981 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
PC [auth 55]Ribosomal_L17_1e5ib7551 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
D [auth 3E]S4e5ib73E1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
HB [auth 32]S4e5ib7321 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
NA [auth A8]Ribosomal_L18pe5ib7A81 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
QC [auth 65]Ribosomal_L18pe5ib7651 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
OA [auth B8]Ribosomal_L19e5ib7B81 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
RC [auth 75]Ribosomal_L19e5ib7751 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
PA [auth C8]Ribosomal_L20e5ib7C81 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
SC [auth 85]Ribosomal_L20e5ib7851 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
QA [auth D8]Ribosomal_L21pe5ib7D81 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
TC [auth 95]Ribosomal_L21pe5ib7951 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
RA [auth E8]Ribosomal_L22e5ib7E81 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
UC [auth A5]Ribosomal_L22e5ib7A51 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
SA [auth F8]Ribosomal_L23_2e5ib7F81 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
VC [auth B5]Ribosomal_L23_2e5ib7B51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
TA [auth G8]ribosomal_L24e5ib7G81 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
WC [auth C5]ribosomal_L24e5ib7C51 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
UA [auth H8]Ribosomal_L25pe5ib7H81 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
UA [auth H8]Ribosomal_TL5_Ce5ib7H82 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
XC [auth D5]Ribosomal_L25pe5ib7D51 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
XC [auth D5]Ribosomal_TL5_Ce5ib7D52 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
VA [auth I8]Ribosomal_L27e5ib7I81 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
YC [auth E5]Ribosomal_L27e5ib7E51 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
WA [auth J8]Ribosomal_L28e5ib7J81 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
ZC [auth F5]Ribosomal_L28e5ib7F51 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
E [auth 4E]Ribosomal_S5_Ce5ib74E2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth 4E]Ribosomal_S5e5ib74E1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
IB [auth 42]Ribosomal_S5_Ce5ib7422 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
IB [auth 42]Ribosomal_S5e5ib7421 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
AD [auth G5]Ribosomal_L29e5ib7G51 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
XA [auth K8]Ribosomal_L29e5ib7K81 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
BD [auth H5]Ribosomal_L30e5ib7H51 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
YA [auth L8]Ribosomal_L30e5ib7L81 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
ZA [auth M8]Ribosomal_L31e5ib7M81 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AB [auth N8]Ribosomal_L32pe5ib7N81 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
CD [auth J5]Ribosomal_L32pe5ib7J51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BB [auth O8]Ribosomal_L33e5ib7O81 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CB [auth P8]Ribosomal_L34e5ib7P81 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DD [auth L5]Ribosomal_L34e5ib7L51 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DB [auth Q8]Ribosomal_L35pe5ib7Q81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
ED [auth M5]Ribosomal_L35pe5ib7M51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
F [auth 5E]Ribosomal_S6e5ib75E1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
JB [auth 52]Ribosomal_S6e5ib7521 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
G [auth 6E]Ribosomal_S7_1e5ib76E1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
KB [auth 62]Ribosomal_S7e5ib7621 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
H [auth 7E]Ribosomal_S8_Ne5ib77E2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth 7E]Ribosomal_S8_Ce5ib77E1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
LB [auth 72]Ribosomal_S8_Ne5ib7722 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
LB [auth 72]Ribosomal_S8_Ce5ib7721 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
I [auth 8E]Ribosomal_S9e5ib78E1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
MB [auth 82]Ribosomal_S9e5ib7821 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth 2I],
OB [auth 2A]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth 3I],
PB [auth 3A]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
M [auth 4I],
QB [auth 4A]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
O [auth 6I],
SB [auth 6A]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
P [auth 7I],
TB [auth 7A]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth 9I],
VB [auth 9A]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
S [auth AI],
WB [auth AA]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
B [auth 1E],
FB [auth 12]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
BA [auth 71]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
CA [auth 11],
FC [auth 19]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
CA [auth 11],
FC [auth 19]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domainDomain
C [auth 2E],
GB [auth 22]
PF07650KH domain (KH_2)KH domainDomain
C [auth 2E],
GB [auth 22]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
DA [auth 21],
GC [auth 29]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
EA [auth 31],
HC [auth 39]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
FA [auth 41],
IC [auth 49]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
FA [auth 41],
IC [auth 49]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
HA [auth 61],
KC [auth 69]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
HA [auth 61],
KC [auth 69]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
IA [auth 58],
LC [auth 15]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
JA [auth 68],
MC [auth 25]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
KA [auth 78],
NC [auth 35]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
LA [auth 88],
OC [auth 45]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
MA [auth 98],
PC [auth 55]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
D [auth 3E],
HB [auth 32]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth 3E],
HB [auth 32]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
OA [auth B8],
RC [auth 75]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
PA [auth C8],
SC [auth 85]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
QA [auth D8],
TC [auth 95]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
RA [auth E8],
UC [auth A5]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
SA [auth F8],
VC [auth B5]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
TA [auth G8],
WC [auth C5]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
TA [auth G8],
WC [auth C5]
PF00467KOW motif (KOW)KOW motif- Family
UA [auth H8],
XC [auth D5]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...Domain
UA [auth H8],
XC [auth D5]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
WA [auth J8],
ZC [auth F5]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
E [auth 4E],
IB [auth 42]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth 4E],
IB [auth 42]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
AD [auth G5],
XA [auth K8]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
BD [auth H5],
YA [auth L8]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
ZA [auth M8]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AB [auth N8],
CD [auth J5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
CB [auth P8],
DD [auth L5]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DB [auth Q8],
ED [auth M5]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
F [auth 5E],
JB [auth 52]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
I [auth 8E],
MB [auth 82]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 13],
EB [auth 1G]
16S ribosomal RNA---
J [auth 1I],
NB [auth 1A]
30S ribosomal protein S10
K [auth 2I],
OB [auth 2A]
30S ribosomal protein S11
L [auth 3I],
PB [auth 3A]
30S ribosomal protein S12
M [auth 4I],
QB [auth 4A]
30S ribosomal protein S13
N [auth 5I],
RB [auth 5A]
30S ribosomal protein S14 type Z---
O [auth 6I],
SB [auth 6A]
30S ribosomal protein S15
P [auth 7I],
TB [auth 7A]
30S ribosomal protein S16
Q [auth 8I],
UB [auth 8A]
30S ribosomal protein S17---
R [auth 9I],
VB [auth 9A]
30S ribosomal protein S18
S [auth AI],
WB [auth AA]
30S ribosomal protein S19
B [auth 1E],
FB [auth 12]
30S ribosomal protein S2
T [auth BI],
XB [auth BA]
30S ribosomal protein S20
U [auth 1F],
YB [auth 1B]
30S ribosomal protein Thx -
V [auth 1K]tRNALys---
AC [auth 2L],
W [auth 2K]
tRNAfMet---
BC [auth 3L],
X [auth 3K],
ZB [auth 1L]
tRNALys---
CC [auth 4L],
Y [auth 4K]
mRNA---
DC [auth 14],
Z [auth 1H]
23S ribosomal RNA---
AA [auth 16],
EC [auth 1J]
5S ribosomal RNA---
BA [auth 71]50S ribosomal protein L1
CA [auth 11],
FC [auth 19]
50S ribosomal protein L2
C [auth 2E],
GB [auth 22]
30S ribosomal protein S3
DA [auth 21],
GC [auth 29]
50S ribosomal protein L3
EA [auth 31],
HC [auth 39]
50S ribosomal protein L4
FA [auth 41],
IC [auth 49]
50S ribosomal protein L5
GA [auth 51],
JC [auth 59]
50S ribosomal protein L6---
HA [auth 61],
KC [auth 69]
50S ribosomal protein L9
IA [auth 58],
LC [auth 15]
50S ribosomal protein L13
JA [auth 68],
MC [auth 25]
50S ribosomal protein L14
KA [auth 78],
NC [auth 35]
50S ribosomal protein L15
LA [auth 88],
OC [auth 45]
50S ribosomal protein L16
MA [auth 98],
PC [auth 55]
50S ribosomal protein L17
D [auth 3E],
HB [auth 32]
30S ribosomal protein S4
NA [auth A8],
QC [auth 65]
50S ribosomal protein L18
OA [auth B8],
RC [auth 75]
50S ribosomal protein L19
PA [auth C8],
SC [auth 85]
50S ribosomal protein L20
QA [auth D8],
TC [auth 95]
50S ribosomal protein L21
RA [auth E8],
UC [auth A5]
50S ribosomal protein L22
SA [auth F8],
VC [auth B5]
50S ribosomal protein L23
TA [auth G8],
WC [auth C5]
50S ribosomal protein L24
UA [auth H8],
XC [auth D5]
50S ribosomal protein L25
VA [auth I8],
YC [auth E5]
50S ribosomal protein L27
WA [auth J8],
ZC [auth F5]
50S ribosomal protein L28
E [auth 4E],
IB [auth 42]
30S ribosomal protein S5
AD [auth G5],
XA [auth K8]
50S ribosomal protein L29
BD [auth H5],
YA [auth L8]
50S ribosomal protein L30
ZA [auth M8]50S ribosomal protein L31
AB [auth N8],
CD [auth J5]
50S ribosomal protein L32
BB [auth O8]50S ribosomal protein L33
CB [auth P8],
DD [auth L5]
50S ribosomal protein L34
DB [auth Q8],
ED [auth M5]
50S ribosomal protein L35
F [auth 5E],
JB [auth 52]
30S ribosomal protein S6
G [auth 6E],
KB [auth 62]
30S ribosomal protein S7
H [auth 7E],
LB [auth 72]
30S ribosomal protein S8---
I [auth 8E],
MB [auth 82]
30S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth 1I],
NB [auth 1A]
IPR001848Small ribosomal subunit protein uS10Family
J [auth 1I],
NB [auth 1A]
IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth 1I],
NB [auth 1A]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth 1I],
NB [auth 1A]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth 2I],
OB [auth 2A]
IPR001971Small ribosomal subunit protein uS11Family
K [auth 2I],
OB [auth 2A]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth 2I],
OB [auth 2A]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth 2I],
OB [auth 2A]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth 3I],
PB [auth 3A]
IPR006032Small ribosomal subunit protein uS12Family
L [auth 3I],
PB [auth 3A]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth 3I],
PB [auth 3A]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
M [auth 4I],
QB [auth 4A]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth 4I],
QB [auth 4A]
IPR001892Small ribosomal subunit protein uS13Family
M [auth 4I],
QB [auth 4A]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth 4I],
QB [auth 4A]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth 4I],
QB [auth 4A]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
O [auth 6I],
SB [auth 6A]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
O [auth 6I],
SB [auth 6A]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth 6I],
SB [auth 6A]
IPR000589Small ribosomal subunit protein uS15Family
P [auth 7I],
TB [auth 7A]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth 7I],
TB [auth 7A]
IPR000307Small ribosomal subunit protein bS16Family
R [auth 9I],
VB [auth 9A]
IPR001648Small ribosomal subunit protein bS18Family
R [auth 9I],
VB [auth 9A]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth 9I],
VB [auth 9A]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
S [auth AI],
WB [auth AA]
IPR002222Small ribosomal subunit protein uS19Family
S [auth AI],
WB [auth AA]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
S [auth AI],
WB [auth AA]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AI],
WB [auth AA]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth 1E],
FB [auth 12]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth 1E],
FB [auth 12]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth 1E],
FB [auth 12]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth 1E],
FB [auth 12]
IPR001865Small ribosomal subunit protein uS2Family
T [auth BI],
XB [auth BA]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth BI],
XB [auth BA]
IPR002583Small ribosomal subunit protein bS20Family
U [auth 1F],
YB [auth 1B]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
U [auth 1F],
YB [auth 1B]
IPR031414Small ribosomal subunit protein bTHXFamily
BA [auth 71]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
BA [auth 71]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
BA [auth 71]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
BA [auth 71]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
BA [auth 71]IPR002143Large ribosomal subunit protein uL1Family
BA [auth 71]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
CA [auth 11],
FC [auth 19]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth 11],
FC [auth 19]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth 11],
FC [auth 19]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth 11],
FC [auth 19]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
CA [auth 11],
FC [auth 19]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
CA [auth 11],
FC [auth 19]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth 11],
FC [auth 19]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth 11],
FC [auth 19]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth 11],
FC [auth 19]
IPR002171Large ribosomal subunit protein uL2Family
C [auth 2E],
GB [auth 22]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth 2E],
GB [auth 22]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth 2E],
GB [auth 22]
IPR004087K Homology domainDomain
C [auth 2E],
GB [auth 22]
IPR004044K Homology domain, type 2Domain
C [auth 2E],
GB [auth 22]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth 2E],
GB [auth 22]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth 2E],
GB [auth 22]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth 2E],
GB [auth 22]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth 21],
GC [auth 29]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth 21],
GC [auth 29]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
DA [auth 21],
GC [auth 29]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth 21],
GC [auth 29]
IPR000597Large ribosomal subunit protein uL3Family
EA [auth 31],
HC [auth 39]
IPR013005Large ribosomal subunit protein uL4-likeFamily
EA [auth 31],
HC [auth 39]
IPR002136Large ribosomal subunit protein uL4Family
EA [auth 31],
HC [auth 39]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
FA [auth 41],
IC [auth 49]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
FA [auth 41],
IC [auth 49]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth 41],
IC [auth 49]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth 41],
IC [auth 49]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth 41],
IC [auth 49]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
FA [auth 41],
IC [auth 49]
IPR002132Large ribosomal subunit protein uL5Family
HA [auth 61],
KC [auth 69]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth 61],
KC [auth 69]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth 61],
KC [auth 69]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
KC [auth 69]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
KC [auth 69]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth 61],
KC [auth 69]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth 61],
KC [auth 69]
IPR000244Large ribosomal subunit protein bL9Family
IA [auth 58],
LC [auth 15]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IA [auth 58],
LC [auth 15]
IPR005822Large ribosomal subunit protein uL13Family
IA [auth 58],
LC [auth 15]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IA [auth 58],
LC [auth 15]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
JA [auth 68],
MC [auth 25]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
JA [auth 68],
MC [auth 25]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth 68],
MC [auth 25]
IPR000218Large ribosomal subunit protein uL14Family
JA [auth 68],
MC [auth 25]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
KA [auth 78],
NC [auth 35]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
KA [auth 78],
NC [auth 35]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth 78],
NC [auth 35]
IPR030878Large ribosomal subunit protein uL15Family
KA [auth 78],
NC [auth 35]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KA [auth 78],
NC [auth 35]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
LA [auth 88],
OC [auth 45]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
LA [auth 88],
OC [auth 45]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
LA [auth 88],
OC [auth 45]
IPR016180Large ribosomal subunit protein uL16 domainDomain
LA [auth 88],
OC [auth 45]
IPR047873Large ribosomal subunit protein uL16Family
MA [auth 98],
PC [auth 55]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
MA [auth 98],
PC [auth 55]
IPR000456Large ribosomal subunit protein bL17Family
D [auth 3E],
HB [auth 32]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth 3E],
HB [auth 32]
IPR002942RNA-binding S4 domainDomain
D [auth 3E],
HB [auth 32]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth 3E],
HB [auth 32]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth 3E],
HB [auth 32]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth 3E],
HB [auth 32]
IPR022801Small ribosomal subunit protein uS4Family
NA [auth A8],
QC [auth 65]
IPR005484Large ribosomal subunit protein uL18Family
NA [auth A8],
QC [auth 65]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
OA [auth B8],
RC [auth 75]
IPR001857Large ribosomal subunit protein bL19Family
OA [auth B8],
RC [auth 75]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
OA [auth B8],
RC [auth 75]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
OA [auth B8],
RC [auth 75]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth C8],
SC [auth 85]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
PA [auth C8],
SC [auth 85]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
PA [auth C8],
SC [auth 85]
IPR005813Large ribosomal subunit protein bL20Family
QA [auth D8],
TC [auth 95]
IPR028909Large ribosomal subunit protein bL21-likeFamily
QA [auth D8],
TC [auth 95]
IPR001787Large ribosomal subunit protein bL21Family
QA [auth D8],
TC [auth 95]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
RA [auth E8],
UC [auth A5]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
RA [auth E8],
UC [auth A5]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
RA [auth E8],
UC [auth A5]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
RA [auth E8],
UC [auth A5]
IPR001063Large ribosomal subunit protein uL22Family
RA [auth E8],
UC [auth A5]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
SA [auth F8],
VC [auth B5]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SA [auth F8],
VC [auth B5]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
SA [auth F8],
VC [auth B5]
IPR013025Large ribosomal subunit protein uL23-likeFamily
TA [auth G8],
WC [auth C5]
IPR003256Large ribosomal subunit protein uL24Family
TA [auth G8],
WC [auth C5]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TA [auth G8],
WC [auth C5]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth G8],
WC [auth C5]
IPR005824KOWDomain
TA [auth G8],
WC [auth C5]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth G8],
WC [auth C5]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
UA [auth H8],
XC [auth D5]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
UA [auth H8],
XC [auth D5]
IPR001021Ribosomal protein bL25, long-formFamily
UA [auth H8],
XC [auth D5]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
UA [auth H8],
XC [auth D5]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
UA [auth H8],
XC [auth D5]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
UA [auth H8],
XC [auth D5]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
UA [auth H8],
XC [auth D5]
IPR050070Bacterial ribosomal protein bL25Family
VA [auth I8],
YC [auth E5]
IPR001684Large ribosomal subunit protein bL27Family
VA [auth I8],
YC [auth E5]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
WA [auth J8],
ZC [auth F5]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
WA [auth J8],
ZC [auth F5]
IPR050096Bacterial ribosomal protein bL28Family
WA [auth J8],
ZC [auth F5]
IPR026569Large ribosomal subunit protein bL28Family
WA [auth J8],
ZC [auth F5]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
E [auth 4E],
IB [auth 42]
IPR000851Small ribosomal subunit protein uS5Family
E [auth 4E],
IB [auth 42]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth 4E],
IB [auth 42]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth 4E],
IB [auth 42]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth 4E],
IB [auth 42]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth 4E],
IB [auth 42]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth 4E],
IB [auth 42]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
AD [auth G5],
XA [auth K8]
IPR050063Universal ribosomal protein uL29Family
AD [auth G5],
XA [auth K8]
IPR001854Large ribosomal subunit protein uL29Family
AD [auth G5],
XA [auth K8]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
AD [auth G5],
XA [auth K8]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
BD [auth H5],
YA [auth L8]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
BD [auth H5],
YA [auth L8]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
BD [auth H5],
YA [auth L8]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
BD [auth H5],
YA [auth L8]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
ZA [auth M8]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth M8]IPR027491Large ribosomal subunit protein bL31 type AFamily
ZA [auth M8]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth M8]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth N8],
CD [auth J5]
IPR002677Large ribosomal subunit protein bL32Family
AB [auth N8],
CD [auth J5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth N8],
CD [auth J5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BB [auth O8]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BB [auth O8]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BB [auth O8]IPR001705Large ribosomal subunit protein bL33Family
BB [auth O8]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CB [auth P8],
DD [auth L5]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CB [auth P8],
DD [auth L5]
IPR000271Large ribosomal subunit protein bL34Family
DB [auth Q8],
ED [auth M5]
IPR021137Large ribosomal subunit protein bL35-likeFamily
DB [auth Q8],
ED [auth M5]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DB [auth Q8],
ED [auth M5]
IPR001706Large ribosomal subunit protein bL35Family
DB [auth Q8],
ED [auth M5]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
F [auth 5E],
JB [auth 52]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth 5E],
JB [auth 52]
IPR000529Small ribosomal subunit protein bS6Family
F [auth 5E],
JB [auth 52]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth 5E],
JB [auth 52]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth 5E],
JB [auth 52]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth 6E],
KB [auth 62]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth 6E],
KB [auth 62]
IPR000235Small ribosomal subunit protein uS7Family
G [auth 6E],
KB [auth 62]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth 6E],
KB [auth 62]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth 6E],
KB [auth 62]
IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth 8E],
MB [auth 82]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth 8E],
MB [auth 82]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
I [auth 8E],
MB [auth 82]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth 8E],
MB [auth 82]
IPR000754Small ribosomal subunit protein uS9Family
I [auth 8E],
MB [auth 82]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily