5IFS

Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00789e5ifsA1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF00789ECOD (1.6)
CPF00789e5ifsC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF00789ECOD (1.6)
BPF02359e5ifsB4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: double psiF: PF02359ECOD (1.6)
BPF17862e5ifsB3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17862ECOD (1.6)
BPF02933e5ifsB2 A: a+b two layersX: Cdc48 domain 2-like (From Topology)H: Cdc48 domain 2-like (From Topology)T: Cdc48 domain 2-likeF: PF02933ECOD (1.6)
BPF00004e5ifsB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00004ECOD (1.6)
DPF02359e5ifsD4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: double psiF: PF02359ECOD (1.6)
DPF17862e5ifsD3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17862ECOD (1.6)
DPF02933e5ifsD2 A: a+b two layersX: Cdc48 domain 2-like (From Topology)H: Cdc48 domain 2-like (From Topology)T: Cdc48 domain 2-likeF: PF02933ECOD (1.6)
DPF00004e5ifsD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00004ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF00789UBX domain (UBX)UBX domainThis domain is present in ubiquitin-regulatory proteins and is a general Cdc48-interacting module [2].Domain
B, D
PF02933Cell division protein 48 (CDC48), domain 2 (CDC48_2)Cell division protein 48 (CDC48), domain 2This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the C-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
B, D
PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains.Domain
B, D
PF02359Cell division protein 48 (CDC48), N-terminal domain (CDC48_N)Cell division protein 48 (CDC48), N-terminal domainThis domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
B, D
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Tether containing UBX domain for GLUT4-
B, D
Transitional endoplasmic reticulum ATPase

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
PharosQ9BZE9
B, D
PharosP55072