5LQX
Structure of F-ATPase from Pichia angusta, state3
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
N [auth J] | SCOP2B Superfamily | F1 ATPase inhibitor, IF1, C-terminal domain | 8037355 | 3001557 | SCOP2B (2022-06-29) |
K [auth G] | SCOP2 Family | ATP synthase gamma subunit-like | 8097355 | 4000503 | SCOP2 (2022-06-29) |
K [auth G] | SCOP2 Superfamily | ATP synthase gamma subunit-like | 8097356 | 3000451 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
O [auth K] | ATP-synt_C | e5lqxK1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
P [auth L] | ATP-synt_C | e5lqxL1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
Q [auth M] | ATP-synt_C | e5lqxM1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
T [auth P] | ATP-synt_C | e5lqxP1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
V [auth R] | ATP-synt_C | e5lqxR1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
R [auth N] | ATP-synt_C | e5lqxN1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
S [auth O] | ATP-synt_C | e5lqxO1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
U [auth Q] | ATP-synt_C | e5lqxQ1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
W [auth S] | ATP-synt_C | e5lqxS1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
X [auth T] | ATP-synt_C | e5lqxT1 | A: extended segments | X: F1F0 ATP synthase subunit C (From Topology) | H: F1F0 ATP synthase subunit C (From Topology) | T: F1F0 ATP synthase subunit C | F: ATP-synt_C | ECOD (1.6) |
Y [auth U] | OSCP | e5lqxU1 | A: alpha bundles | X: ATPD N-terminal domain-like | H: N-terminal domain of the delta subunit of the F1F0-ATP synthase (From Topology) | T: N-terminal domain of the delta subunit of the F1F0-ATP synthase | F: OSCP | ECOD (1.6) |
Z [auth V] | Mt_ATP-synt_B | e5lqxV1 | A: extended segments | X: F-type ATP synthase subunit b (From Topology) | H: F-type ATP synthase subunit b (From Topology) | T: F-type ATP synthase subunit b | F: Mt_ATP-synt_B | ECOD (1.6) |
AA [auth W] | Mt_ATP-synt_D | e5lqxW1 | A: extended segments | X: ATP synthase D chain-like (From Topology) | H: ATP synthase D chain-like (From Topology) | T: ATP synthase D chain-like | F: Mt_ATP-synt_D | ECOD (1.6) |
CA [auth Y] | ATP-synt_A | e5lqxY1 | A: alpha bundles | X: F1F0 ATP synthase subunit A (From Topology) | H: F1F0 ATP synthase subunit A (From Topology) | T: F1F0 ATP synthase subunit A | F: ATP-synt_A | ECOD (1.6) |
E [auth A] | ATP-synt_ab_N | e5lqxA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
E [auth A] | ATP-synt_ab_C | e5lqxA2 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
E [auth A] | ATP-synt_ab | e5lqxA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
F [auth B] | ATP-synt_ab_N | e5lqxB3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
F [auth B] | ATP-synt_ab_C | e5lqxB1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
F [auth B] | ATP-synt_ab | e5lqxB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
G [auth C] | ATP-synt_ab_N | e5lqxC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
G [auth C] | ATP-synt_ab_C | e5lqxC1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
G [auth C] | ATP-synt_ab | e5lqxC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
H [auth D] | ATP-synt_ab_N | e5lqxD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
H [auth D] | ATP-synt_ab_C | e5lqxD1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
H [auth D] | ATP-synt_ab | e5lqxD3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
I [auth E] | ATP-synt_ab_N | e5lqxE3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
I [auth E] | ATP-synt_ab_C | e5lqxE1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
I [auth E] | ATP-synt_ab | e5lqxE2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
J [auth F] | ATP-synt_ab_N | e5lqxF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |
J [auth F] | ATP-synt_ab_C | e5lqxF3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |
J [auth F] | ATP-synt_ab | e5lqxF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
K [auth G] | ATP-synt | e5lqxG1 | A: a/b three-layered sandwiches | X: ATP synthase (F1-ATPase), gamma subunit (From Topology) | H: ATP synthase (F1-ATPase), gamma subunit (From Topology) | T: ATP synthase (F1-ATPase), gamma subunit | F: ATP-synt | ECOD (1.6) |
L [auth H] | ATP-synt_DE_N | e5lqxH2 | A: beta sandwiches | X: Epsilon subunit of F1F0-ATP synthase-N | H: Epsilon subunit of F1F0-ATP synthase-N (From Topology) | T: Epsilon subunit of F1F0-ATP synthase-N | F: ATP-synt_DE_N | ECOD (1.6) |
L [auth H] | KOG1758_1 | e5lqxH1 | A: alpha bundles | X: Long alpha-hairpin | H: Epsilon subunit of F1F0-ATP synthase C-terminal domain (From Topology) | T: Epsilon subunit of F1F0-ATP synthase C-terminal domain | F: KOG1758_1 | ECOD (1.6) |
M [auth I] | ATP-synt_Eps | e5lqxI1 | A: extended segments | X: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology) | H: Epsilon subunit of mitochondrial F1F0-ATP synthase (From Topology) | T: Epsilon subunit of mitochondrial F1F0-ATP synthase | F: ATP-synt_Eps | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain | |
Y [auth U] | PF00213 | ATP synthase delta (OSCP) subunit (OSCP) | ATP synthase delta (OSCP) subunit | - | Family |
E [auth A], F [auth B], G [auth C] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
E [auth A], F [auth B], G [auth C] | PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | Domain | |
E [auth A], F [auth B], G [auth C] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
H [auth D], I [auth E], J [auth F] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
H [auth D], I [auth E], J [auth F] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
H [auth D], I [auth E], J [auth F] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
K [auth G] | PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | |
L [auth H] | PF21334 | Fungal epsilon subunit of F1F0-ATP synthase C-terminal domain (ATPD_C_fung) | Fungal epsilon subunit of F1F0-ATP synthase C-terminal domain | F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core, and F0 which contains the membrane proton channel. This entry includes ATP synthase subunit delta from fungi (called epsilon in bacteria or chloropla ... | Domain |
M [auth I] | PF04627 | Mitochondrial ATP synthase epsilon chain (ATP-synt_Eps) | Mitochondrial ATP synthase epsilon chain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | F-type ATPase | ATP synthase (F-ATPase), State 1 |