5LZL | pdb_00005lzl

Pyrobaculum calidifontis 5-aminolaevulinic acid dehydratase

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)	8072520	4003237	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Aldolase	8072521	3000445	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Aldolase	8072521	3000445	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e5lzlA1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
B		e5lzlB1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
C		e5lzlC1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
D		e5lzlD1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
E		e5lzlE1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
F		e5lzlF1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
G		e5lzlG1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
H		e5lzlH1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
J		e5lzlJ1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
K		e5lzlK1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
L		e5lzlL1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)
I		e5lzlI1	A: a/b three-layered sandwiches	X: ALDH-like	H: ALDH-like	T: ALDH-like	F:	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
B	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
C	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
D	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
E	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
F	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
G	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
H	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
J	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
K	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
L	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)
I	3.20.20.70	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Aldolase class I	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Delta-aminolevulinic acid dehydratase	hydro-lyase activity lyase activity catalytic activity porphobilinogen synthase activity carbon-oxygen lyase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	heme metabolic process pigment metabolic process porphyrin-containing compound biosynthetic process tetrapyrrole metabolic process heme biosynthetic process protoporphyrinogen IX metabolic process pigment biosynthetic process protoporphyrinogen IX biosynthetic process tetrapyrrole biosynthetic process biosynthetic process metabolic process cellular process porphyrin-containing compound metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001731	Delta-aminolevulinic acid dehydratase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR030656	Delta-aminolevulinic acid dehydratase, active site	Active Site
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.